BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0836
(698 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 29 0.11
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 24 5.3
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 23 9.2
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 23 9.2
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 23 9.2
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 23 9.2
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 29.5 bits (63), Expect = 0.11
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 603 LFVCYACDTVKVLRQQPYPHPVRKH*QRPIQSVTNHRLV 487
L AC Q+ P+P+ + RP +V+NHR+V
Sbjct: 12 LLAVVACAQAHASHQRRVPYPLPRFLPRPHHTVSNHRIV 50
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 23.8 bits (49), Expect = 5.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 272 IFIRPWIESSL-VLHHWLTGLNSCILINLT 186
+F P+ SL VL +W GL C L+N T
Sbjct: 187 LFCVPFTFISLFVLQYWPFGLAMCRLVNYT 216
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 23.0 bits (47), Expect = 9.2
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 420 SGIFKHVPHDGMRYAT---IVVTHSDVRSPYFILFSYQPNP 307
S IF+ +P +R ++V H + R P F Y P P
Sbjct: 513 STIFRALPSINLRIDAPFLLLVGHDETRLPLFYGTIYDPTP 553
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 540 LDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVH 653
LD + AA L HN+ +FVV+E+++ LA +H
Sbjct: 175 LDRLSNAAGLKQLLLSHNRLERFVVTEQVN---LAALH 209
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 540 LDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVH 653
LD + AA L HN+ +FVV+E+++ LA +H
Sbjct: 175 LDRLSNAAGLKQLLLSHNRLERFVVTEQVN---LAALH 209
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 540 LDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVH 653
LD + AA L HN+ +FVV+E+++ LA +H
Sbjct: 175 LDRLSNAAGLKQLLLSHNRLERFVVTEQVN---LAALH 209
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,376
Number of Sequences: 2352
Number of extensions: 17880
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -