Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0836
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase pro... 125 1e-28
M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase pro... 125 1e-28
D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase pre... 125 1e-28
BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase (... 125 1e-28
BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase (... 125 1e-28
AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase (... 125 1e-28
AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase (... 125 1e-28
>M64590-1|AAA36463.1| 1020|Homo sapiens glycine decarboxylase
protein.
Length = 1020
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>M63635-1|AAA36478.1| 1020|Homo sapiens glycine decarboxylase
protein.
Length = 1020
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>D90239-1|BAA14286.1| 1020|Homo sapiens glycine decarboxylase
precursor protein.
Length = 1020
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>BC111995-1|AAI11996.1| 1020|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1020
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>BC111993-1|AAI11994.1| 1020|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1020
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>AL353718-2|CAH74116.1| 1036|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1036
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
>AL162411-3|CAH69992.1| 1036|Homo sapiens glycine dehydrogenase
(decarboxylating) protein.
Length = 1036
Score = 125 bits (302), Expect = 1e-28
Identities = 51/81 (62%), Positives = 65/81 (80%)
Frame = +1
Query: 265 MNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPY 444
+ + +P+ E +++ + I+ KN+IWRSYIGMGY+NC VP I+RN+ EN GW TQYTPY
Sbjct: 105 LKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPY 164
Query: 445 QPEVAQGRLESLLNYQTMVSD 507
QPEV+QGRLESLLNYQTMV D
Sbjct: 165 QPEVSQGRLESLLNYQTMVCD 185
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 510 TGLDVANASLLDEGTAAAEALSLCHRHNKRTKFVVSERLHPQTLAVVHTRMDALGL 677
TGLD+ANASLLDEGTAAAEAL LC+RHNKR KF+V R HPQT+AVV TR G+
Sbjct: 187 TGLDMANASLLDEGTAAAEALQLCYRHNKRRKFLVDPRCHPQTIAVVQTRAKYTGV 242
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2
Query: 113 DTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQSK 259
+ L P DF RHIGP D+D ML LG S+D+L VP I+ K
Sbjct: 54 ERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,846,826
Number of Sequences: 237096
Number of extensions: 2332577
Number of successful extensions: 7534
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7534
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -