Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0832
(417 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 124 5e-29
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 124 5e-29
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 124 5e-29
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 124 5e-29
AY075181-1|AAL68051.1| 497|Drosophila melanogaster AT12868p pro... 28 5.7
AE014134-2677|AAN10932.1| 497|Drosophila melanogaster CG31819-P... 28 5.7
AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA... 27 10.0
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 124 bits (299), Expect = 5e-29
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 63 IEKYYTRLTXDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRLT DF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 124 bits (299), Expect = 5e-29
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 63 IEKYYTRLTXDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRLT DF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 124 bits (299), Expect = 5e-29
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 63 IEKYYTRLTXDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRLT DF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 124 bits (299), Expect = 5e-29
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 63 IEKYYTRLTXDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 242
IEKYYTRLT DF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 243 ERER 254
ERER
Sbjct: 77 ERER 80
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 257 DNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 412
DNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AY075181-1|AAL68051.1| 497|Drosophila melanogaster AT12868p
protein.
Length = 497
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 260 CHPLTLLFLKFDRDSSHLRV 201
CH LT LFL+FD D+ L++
Sbjct: 257 CHKLTRLFLRFDCDTLSLKL 276
>AE014134-2677|AAN10932.1| 497|Drosophila melanogaster CG31819-PA
protein.
Length = 497
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 260 CHPLTLLFLKFDRDSSHLRV 201
CH LT LFL+FD D+ L++
Sbjct: 257 CHKLTRLFLRFDCDTLSLKL 276
>AE014134-2275|AAF53240.2| 2171|Drosophila melanogaster CG9932-PA
protein.
Length = 2171
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 240 EERERVTTMSQKCLLSNMTSSK*TPTPR 323
++ E T +SQK S+ TSS TPTPR
Sbjct: 492 DDEEEPTDLSQKGGCSSDTSSVGTPTPR 519
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,774,465
Number of Sequences: 53049
Number of extensions: 333783
Number of successful extensions: 912
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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