Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0831
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 98 5e-21
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 91 9e-19
11_01_0617 - 4939108-4939259,4939584-4940259 31 1.0
09_02_0113 + 4408171-4409415,4409902-4409907 29 3.2
11_06_0092 + 19973364-19975983,19976272-19976648 29 4.2
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 4.2
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166... 29 4.2
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 4.2
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 5.6
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 7.4
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 28 7.4
11_06_0690 + 26303733-26306540 27 9.7
09_02_0118 - 4451228-4452565 27 9.7
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 9.7
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 27 9.7
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINV 435
QVYEET+G+ V DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+G++V
Sbjct: 104 QVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSV 163
Query: 436 PSL 444
P+L
Sbjct: 164 PAL 166
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDXAT 253
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD AT
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSAT 102
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 510 GDLYGIVHENTLVKHRMXVPPKAKGTVT 593
GDLY V ENTL+KH + +PP + G ++
Sbjct: 188 GDLYATVFENTLMKHHVALPPGSMGKIS 215
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 90.6 bits (215), Expect = 9e-19
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQSIYIP 420
QVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I + +YIP
Sbjct: 66 QVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 125
Query: 421 KGINVPSL 444
+G++VP+L
Sbjct: 126 RGVSVPAL 133
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DXAT 253
D AT
Sbjct: 61 DSAT 64
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 510 GDLYGIVHENTLVKHRMXVPPKAKGTVT 593
GDLY IV+ENTL++H++ +PP A G ++
Sbjct: 155 GDLYAIVNENTLMQHKVALPPGAMGKIS 182
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
L +A EE+EER G F V+ + +A+++ VR+G LVG ++
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLM 165
>09_02_0113 + 4408171-4409415,4409902-4409907
Length = 416
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 432 RAFPGQGRLTGEFNPFKC*GRVPHXRGDLY-GIVHENTLVK 551
RA P +T F+P+ GR H GD+Y I H L+K
Sbjct: 222 RALPRDTGVTVAFDPYWFEGRCVHAAGDIYWHICHSGRLLK 262
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 259 VYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 381
V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 894 VLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEI 226
EKMS + EL+ +GYN+L G I
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAI 491
>07_03_0909 +
22512313-22512474,22513151-22513465,22513539-22516633,
22516812-22516910,22517031-22517379
Length = 1339
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 531 VQYHTNL--HXDVGPDLNI*MG*IPQSTS-PGQGRHVDTLGDVDGLSQLVDVLE 379
V + T+L H D+ D+N G I S S G G+ TLG ++G SQ + + E
Sbjct: 150 VLFETSLDPHCDLTGDINSPNGHIQSSISWRGDGKFFATLGGLEGSSQKLTIWE 203
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 214 EFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 59 KMASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 138 LDPSSLPKRC--PDLLCTS--WSVSVTM 209
+DP+S+PK C PD LC S W VS +
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFNL 883
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 111 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 127 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>09_02_0118 - 4451228-4452565
Length = 445
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 432 RAFPGQGRLTGEFNPFKC*GRVPHXRGDLY 521
RA P +T F+PF GR H GD+Y
Sbjct: 208 RALPQDTGVTVAFDPFWFEGRCVHAAGDIY 237
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 71 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,887,041
Number of Sequences: 37544
Number of extensions: 402997
Number of successful extensions: 993
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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