Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0826
         (250 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   2.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   6.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   6.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 176 KRYTAL*LLVVICSCVSNKKIRKS 247
           K +  L  L+++C CV  K+ +KS
Sbjct: 262 KNFVCLLSLIILCDCVV-KEAQKS 284


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 49  LKMTNILIDLQSVYRA 2
           LKM   L+D +SV R+
Sbjct: 198 LKMATQLVDFKSVIRS 213


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 202 CSNMQLCIK*KNQ 240
           C N   C++ KNQ
Sbjct: 108 CENQATCVQNKNQ 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,097
Number of Sequences: 336
Number of extensions: 465
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)