BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0824 (698 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light ch... 105 4e-23 Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical pr... 49 4e-06 AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical... 48 5e-06 Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 35 0.049 AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical ... 35 0.064 AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical ... 35 0.064 AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical ... 30 1.4 AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 29 3.2 AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 7.4 AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 28 7.4 Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical pr... 27 9.8 U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 9.8 >U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light chain protein 1 protein. Length = 89 Score = 105 bits (251), Expect = 4e-23 Identities = 47/53 (88%), Positives = 52/53 (98%) Frame = +3 Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254 M DRKAVIKNADMS++MQQDA+DCATQALEK+NIEKDIAA+IKKEFDKKYNPT Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53 Score = 79.8 bits (188), Expect = 2e-15 Identities = 34/35 (97%), Positives = 35/35 (100%) Frame = +2 Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361 HCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89 >Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical protein M18.2 protein. Length = 90 Score = 48.8 bits (111), Expect = 4e-06 Identities = 23/71 (32%), Positives = 40/71 (56%) Frame = +3 Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275 M + K +K DM + + + +A +NI+KD+AAF+K+E DKK+ A+W V Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFG----ATWHV 56 Query: 276 ILARM*HTRLA 308 I + +R++ Sbjct: 57 ICGKCFGSRVS 67 Score = 34.3 bits (75), Expect = 0.085 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 361 H I G+ FGS V++E HFI +V ++++K G Sbjct: 55 HVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89 >AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical protein Y73B6BL.43 protein. Length = 186 Score = 48.4 bits (110), Expect = 5e-06 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = +2 Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKS 358 HCI G++FGS+VT E FIYF +G +A +LFK+ Sbjct: 107 HCICGKHFGSFVTFEPDSFIYFRIGTIAFMLFKT 140 Score = 38.7 bits (86), Expect = 0.004 Identities = 15/47 (31%), Positives = 30/47 (63%) Frame = +3 Query: 111 AVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNP 251 A ++++ M M+Q+A A +++ +++E DIA +K FD++Y P Sbjct: 58 ADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGP 104 >Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical protein C47A10.6 protein. Length = 346 Score = 35.1 bits (77), Expect = 0.049 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 12/77 (15%) Frame = -1 Query: 263 CNAGRIVFLVKFFLDECSYVL--FNVKFLERLSCTVNSILLH----LFAHVSILY----- 117 C+A + +L+ +L C Y L FN+KFL ++ C ++L+H F H+ LY Sbjct: 34 CSAVAVFYLIHTWLSICRYKLMHFNLKFLMKIHCA--ALLIHCVPRFFLHLFDLYYYFFG 91 Query: 116 -DCFAITHLVLGLFLLR 69 DC+ + L F+LR Sbjct: 92 VDCYDMQPSSLRCFILR 108 >AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical protein Y10G11A.2b protein. Length = 129 Score = 34.7 bits (76), Expect = 0.064 Identities = 13/32 (40%), Positives = 25/32 (78%) Frame = +2 Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQVAILLFK 355 C+VGRNFGS++ + FI+F + +++++LF+ Sbjct: 100 CVVGRNFGSHL--DPIQFIHFTVSKISVILFR 129 Score = 33.5 bits (73), Expect = 0.15 Identities = 14/44 (31%), Positives = 28/44 (63%) Frame = +3 Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKY 245 +I++ ++ E +++ AL+ IE +IA+F+K++FD KY Sbjct: 51 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 94 >AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical protein Y10G11A.2a protein. Length = 111 Score = 34.7 bits (76), Expect = 0.064 Identities = 13/32 (40%), Positives = 25/32 (78%) Frame = +2 Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQVAILLFK 355 C+VGRNFGS++ + FI+F + +++++LF+ Sbjct: 82 CVVGRNFGSHL--DPIQFIHFTVSKISVILFR 111 Score = 33.5 bits (73), Expect = 0.15 Identities = 14/44 (31%), Positives = 28/44 (63%) Frame = +3 Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKY 245 +I++ ++ E +++ AL+ IE +IA+F+K++FD KY Sbjct: 33 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 76 >AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical protein Y10G11A.3 protein. Length = 134 Score = 30.3 bits (65), Expect = 1.4 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +3 Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKK 242 +I+ ++ E +++ AL+ IE +IA+F+K++FD K Sbjct: 50 IIQETNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAK 92 >AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical protein Y54F10BM.6 protein. Length = 280 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -1 Query: 560 TVHPLSHSLENRSHQH*LASSCHTLAASYLWECTTARASHEN 435 T+HPL EN H L C +L LW+C T R + + Sbjct: 118 TIHPLPFFSEN----HLLIILCSSLITVNLWKCQTCRKKYSS 155 >AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp associated factor homologprotein 1 protein. Length = 767 Score = 27.9 bits (59), Expect = 7.4 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -2 Query: 424 YPSDNTASAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKI 275 Y D + + KI +L LTA K + S V+V EV HI+ I Sbjct: 642 YHLDERDDSLDSKIGAILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPI 691 >AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical protein F55A3.1 protein. Length = 958 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -1 Query: 227 FLDECSYVLFNVKFLERLSCTVNSILLHLFAH--VSILYDCFAITHLVLGLFLLR 69 ++D C+ LFN+ +R++ + + +F H V ++Y ++ + ++L +LR Sbjct: 520 WMDVCTLPLFNITLSQRIATFATAPFMSIFLHWMVGMVYVFYSASFVILLREILR 574 >Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical protein C17D12.7 protein. Length = 657 Score = 27.5 bits (58), Expect = 9.8 Identities = 27/98 (27%), Positives = 44/98 (44%) Frame = -2 Query: 445 RMRICKGYPSDNTASAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKITTH 266 R+ +C+ P + + KKI + K S LS E E+ S + K Sbjct: 49 RLDLCQISPKKSEKKSKKKKIPSPIKKTNDTK--LSILS--EKSEIRSEKHKNKCKSADL 104 Query: 265 DAMPVGLYFLSNSFLMNAAMSFSMLNFSSA*VAQSTAS 152 DAM L +F NAA+S S+ + +S+ ++ S +S Sbjct: 105 DAMEKNFKELLENFSKNAALSNSLRDEASSIISSSASS 142 >Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical protein F07B10.3 protein. Length = 328 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1 Query: 550 GCTVFTYTVYLIGNSQCWTLTASYLFTLVPGACGVCLYCV--SYNLRELLT 696 GC + + V ++ + W LTA+++F + L+ + SY+L T Sbjct: 130 GCHFYAWVVLILSLATSWGLTAAFMFPQTDRTTEIFLHIIYSSYDLEPYWT 180 >Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical protein F07B10.3 protein. Length = 328 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1 Query: 550 GCTVFTYTVYLIGNSQCWTLTASYLFTLVPGACGVCLYCV--SYNLRELLT 696 GC + + V ++ + W LTA+++F + L+ + SY+L T Sbjct: 130 GCHFYAWVVLILSLATSWGLTAAFMFPQTDRTTEIFLHIIYSSYDLEPYWT 180 >Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical protein C39E9.8b protein. Length = 246 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 138 EEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYN 248 EEM+ A DC +KF+ +KK FD+K N Sbjct: 60 EEMKLQAKDCTVPCFQKFSSITSRPNDLKKCFDEKDN 96 >Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical protein C39E9.8a protein. Length = 248 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 138 EEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYN 248 EEM+ A DC +KF+ +KK FD+K N Sbjct: 60 EEMKLQAKDCTVPCFQKFSSITSRPNDLKKCFDEKDN 96 >U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical protein F35A5.4 protein. Length = 524 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = -3 Query: 300 SCVTYEPKLRPTMQCR*DCISCQILS**MQLCPFQC*ISRALELHSQQHLAASLRSCQHS 121 +CVT RP QC C+ S +CP QC S + Q + + C Sbjct: 292 ACVTNLQVSRPVSQCLPACMPSCTSSCVQSMCPQQCYPSCDMNCIQQYAVQMAPTPCAAQ 351 Query: 120 L*LLCDHTSCL 88 LC+ +SC+ Sbjct: 352 CMPLCE-SSCI 361 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,801,119 Number of Sequences: 27780 Number of extensions: 327897 Number of successful extensions: 897 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 897 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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