BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0823
(648 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 114 2e-27
AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein. 23 6.3
AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein. 23 6.3
AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein. 23 6.3
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 6.3
AF203333-1|AAF19828.1| 119|Anopheles gambiae immune-responsive ... 23 6.3
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 8.3
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 114 bits (275), Expect = 2e-27
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +2
Query: 257 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPX 436
++ KDKFQ+NLDVQ F+PEEISVK D ++VEGKHEEK+D HGY+SR F RRY LP
Sbjct: 7 AVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPK 66
Query: 437 GCTAESVESRLSSDGVLSVIAPRK 508
G + S LSSDG+L++ PRK
Sbjct: 67 GHNEADIVSSLSSDGILTITCPRK 90
>AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 584 WSFTSLRTGPVWAIGILRSP 525
W T PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171
>AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 584 WSFTSLRTGPVWAIGILRSP 525
W T PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171
>AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 584 WSFTSLRTGPVWAIGILRSP 525
W T PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.4 bits (48), Expect = 6.3
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Frame = +2
Query: 299 VQHFAPEEISVKTADGYIVVEGKH---------EEKKDQHGYISRQFTRRYALPXGCTAE 451
++ + PEE +V ++ + +V+G+ E + ++ Y S + + ++
Sbjct: 68 IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSF 127
Query: 452 SVESRLSSDGVLSV--IAPRKCRQQWRVNARFR 544
S S G S+ I+P++ + R+N FR
Sbjct: 128 QQSSYESESGAGSIVQISPQRVSLKLRLNEAFR 160
>AF203333-1|AAF19828.1| 119|Anopheles gambiae immune-responsive
alpha-macroglobulinand complement C3-related protein
IMCR14 protein.
Length = 119
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 584 WSFTSLRTGPVWAIGILRSP 525
W T PV+ +GI++ P
Sbjct: 81 WHLTGFSIDPVYGLGIIKQP 100
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.0 bits (47), Expect = 8.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 584 WSFTSLRTGPVWAIGILRSP 525
W T PV+ +GI++ P
Sbjct: 659 WYLTGFSIDPVYGLGIIKKP 678
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,429
Number of Sequences: 2352
Number of extensions: 14038
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -