Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0822
         (295 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0581 - 24068122-24068355,24068693-24068906,24069675-240697...    28   1.5  
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875           28   1.5  
04_04_0895 - 29168107-29168229,29168617-29170068                       26   4.6  
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    26   6.1  
02_05_1032 + 33637108-33638421                                         25   8.0  

>02_04_0581 -
           24068122-24068355,24068693-24068906,24069675-24069755,
           24069853-24070024,24070806-24070884,24071384-24071477,
           24072065-24072147,24072284-24072401,24072457-24072461
          Length = 359

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/47 (40%), Positives = 21/47 (44%)
 Frame = -2

Query: 270 HHYCTYTDGCHRRHPRRYVSEFNISSCSTCKW*CTESRGRSMGRSKN 130
           HH    +D   R   R      N S+ STCK  C E RG  M  SKN
Sbjct: 33  HHTLRLSDAKKRPDSRAEAGCTNCSADSTCKDDC-ECRGLYMSCSKN 78


>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
          Length = 356

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 198 SSCSTCKW*CTESRGRSMGRSKNRR 124
           +SC  CK  C  S GRS  R++ RR
Sbjct: 252 TSCIFCKSFCRSSGGRSRARARERR 276


>04_04_0895 - 29168107-29168229,29168617-29170068
          Length = 524

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 249 DGCHRRHPRRYVSEFNISSC 190
           DGC RR+P  Y S+  I +C
Sbjct: 259 DGCIRRYPALYGSDDRIQAC 278


>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
            25541673-25541751,25542151-25542238,25542330-25542600,
            25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 264  YCTYTDGCHRRH 229
            YC Y D CH++H
Sbjct: 1924 YCAYGDECHKKH 1935


>02_05_1032 + 33637108-33638421
          Length = 437

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 290 YFLFTQNITIALTLMVVIDDTRVDMFPNLTYL 195
           YF FT+NI     + V     RVD+  + TY+
Sbjct: 289 YFSFTRNILQGKPITVYRGKNRVDLARDFTYI 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,898,408
Number of Sequences: 37544
Number of extensions: 58596
Number of successful extensions: 147
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)