Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0819
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 72 3e-13
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 72 3e-13
At5g10400.1 68418.m01206 histone H3 identical to several histone... 72 3e-13
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 72 3e-13
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 72 3e-13
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 72 3e-13
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 69 2e-12
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 69 2e-12
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 69 2e-12
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 69 2e-12
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 68 5e-12
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 67 9e-12
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 59 2e-09
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 42 5e-04
At4g20240.1 68417.m02957 cytochrome P450, putative similar to |C... 29 2.2
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 28 5.2
At3g62610.1 68416.m07033 myb family transcription factor similar... 28 5.2
At1g49000.1 68414.m05493 expressed protein 27 9.0
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPK+IQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA R+IR+YQKSTE+LIRKLPF ++ E
Sbjct: 45 GTVALRDIRKYQKSTEILIRKLPFQRLVRE 74
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 106
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFE 106
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKD+QLARRIR ERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDVQLARRIRAERA 136
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELL RKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLNRKLPFQRLVRE 74
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQD+KTDLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 69 QRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFE 106
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKSTELLIRKLPF ++ E
Sbjct: 45 GTVALREIRKYQKSTELLIRKLPFQRLVRE 74
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 67.3 bits (157), Expect = 9e-12
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLVREIAQDFK DLRFQS A+ ALQEA+EAYLVGLFE
Sbjct: 70 QRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFE 107
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGERA 421
L TNLCAIHAKRVTIM KDIQLARRIRGERA
Sbjct: 105 LFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQKST+LLIRKLPF ++ E
Sbjct: 46 GTVALREIRKYQKSTDLLIRKLPFQRLVRE 75
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -1
Query: 623 QRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFE 510
QRLV+EIAQ K DLRFQ+ A+ ALQEA+EA++VG+FE
Sbjct: 64 QRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFE 101
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGER 424
+ TNLCA+HAKR TIMPKDIQLA+R+RG+R
Sbjct: 99 MFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPFPSVL*E 608
GTVA REIR+YQK+T+L+IRKLPF ++ E
Sbjct: 40 GTVALREIRKYQKTTDLVIRKLPFQRLVKE 69
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -3
Query: 519 LVRSTNLCAIHAKRVTIMPKDIQLARRIRGE 427
L + LCAIHA+RVT+M KD +LARR+ G+
Sbjct: 144 LFSDSMLCAIHARRVTLMRKDFELARRLGGK 174
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 578 RFQSAAIGALQEASEAYLVGLF-EAPTCVLFTPNV 477
R+ + A+ ALQEA+E YLVGLF ++ C + V
Sbjct: 124 RWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRV 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 697 GTVAPREIRRYQKSTELLIRKLPF 626
GTVA +EIR +QK T LLI F
Sbjct: 83 GTVALKEIRHFQKQTNLLIPAASF 106
>At4g20240.1 68417.m02957 cytochrome P450, putative similar to
|C71R_ARATH Cytochrome P450 71A27 (SP:O65438)
[Arabidopsis thaliana]
Length = 865
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 470 MVTRLA*IAHKLVLRTSQRDKPRLPPGELRWRQTGNANQF-*NPERFL 610
+ T LA + K +L+ KP+LPP R GN +Q NP R+L
Sbjct: 10 LTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQLGPNPHRYL 57
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = -3
Query: 672 VVIRSLLSCLSVSCPFPASCERNRSGFQN*FAFPV--CRHR 556
V RS S S P P+ E SGF+N FP+ CR R
Sbjct: 505 VTDRSASSLASCGLPGPSKNELESSGFRNGSIFPIVYCRRR 545
>At3g62610.1 68416.m07033 myb family transcription factor similar to
myb-like transcription factor GI:168590 from [Zea mays]
Length = 343
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 426 VHHGFVEQVEYPSA*WSHVWRE*HTSWCFEQANEISLACLLESSDGGRLETQISFEILSD 605
V H +E + W VWRE T W ++ + L+ LL DG +E++I +D
Sbjct: 268 VGHKNIETMADDFVDWDFVWREGQTLWDEKEDLDSVLSRLL---DGEEMESEIRQRDSND 324
Query: 606 F 608
F
Sbjct: 325 F 325
>At1g49000.1 68414.m05493 expressed protein
Length = 156
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 561 HRSSPGGKRGLSRWLVRSTNLCAIHAKRVT 472
H SSP KR +LV LCA HA R++
Sbjct: 8 HNSSPSHKRLSVSFLVSMMVLCARHANRLS 37
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,044,780
Number of Sequences: 28952
Number of extensions: 266858
Number of successful extensions: 592
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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