Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0818
(369 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein S25|Schizosacc... 46 2e-06
SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein S25|Sc... 46 2e-06
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 29 0.30
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 0.40
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 28 0.40
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 0.70
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 27 0.93
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c... 25 3.7
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 3.7
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 3.7
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 3.7
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 25 4.9
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 25 4.9
SPAC5H10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 6.5
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 24 6.5
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 6.5
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 24 8.6
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 24 8.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 24 8.6
SPBC409.06 |uch2||ubiquitin C-terminal hydrolase Uch2|Schizosacc... 24 8.6
>SPBC3D6.15 |rps2501|rps25-1|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 88
Score = 46.0 bits (104), Expect = 2e-06
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +2
Query: 134 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALTNLGKK 271
+FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L ++
Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66
Score = 30.7 bits (66), Expect = 0.075
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 256 ELREKGLIKQVVQHHGQVIYTRA 324
+L E+G+I++V QH Q IYTRA
Sbjct: 62 DLAERGVIQKVDQHSKQAIYTRA 84
>SPAC694.05c |rps2502|rps25-2, rps25|40S ribosomal protein
S25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 46.0 bits (104), Expect = 2e-06
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +2
Query: 134 LFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALTNLGKK 271
+FDK +++ KEVP +K I+ +V+ +R+K+ GSLAR A+ +L ++
Sbjct: 21 VFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAER 66
Score = 29.1 bits (62), Expect = 0.23
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 256 ELREKGLIKQVVQHHGQVIYTR 321
+L E+G+I++V QH Q IYTR
Sbjct: 62 DLAERGVIQKVDQHSKQAIYTR 83
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 28.7 bits (61), Expect = 0.30
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 155 HMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPSSSV 42
+M YQ TP HE WT SS L H + PS+ +
Sbjct: 152 YMRAYQLTPEFMAAHEEKTWTASS--LNSHNLTPSNVI 187
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 0.40
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 222 FNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPLDHFFFL-ALP 70
FNL+ GV ++ G S +F+ + + + W F + P+D FL ALP
Sbjct: 151 FNLTFLFTGVFAVIAGASP-NFASICVFDALWSFGVGGNLPVDSAIFLEALP 201
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 28.3 bits (60), Expect = 0.40
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = -1
Query: 285 LFDETFFPKFVSALLAREPRTFN--LSDTTAGVISLYCGTSLYSFSYVGLSNNT---WLF 121
+F+ F+ ++ + + FN LSD VIS G + Y F V LS+ T W
Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSDYWGRVISRTLGDTTYGFPNVSLSSITSQEWYR 257
Query: 120 NLSRTFPLDHF 88
N + +P+ F
Sbjct: 258 NANFPYPIITF 268
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 0.70
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 162 SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPP 64
SF Y L NN++L +S + ++ F++ PPP
Sbjct: 1008 SFIYGSLQNNSFLSRVSPSSLEENVFYIQHPPP 1040
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 27.1 bits (57), Expect = 0.93
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 36 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRC 134
K HR DP+ P RR GP + V + +C
Sbjct: 203 KVHRPNHFDPLVKLPTRRRGPGRRPVVALAMKC 235
>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 3.7
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = -1
Query: 285 LFDETFFPKFVSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRT 106
LFD F+ L F+L TTAG+I L S+ +F +S+ W+ + T
Sbjct: 233 LFDLILLWPFLIILHLYGVERFSLPSTTAGLIVLIINASI-TF----VSDYLWVIAMLMT 287
Query: 105 FPLDHFFFLALPPPDPSFF 49
PL ++L P FF
Sbjct: 288 SPLLVTVGMSLSIPLALFF 306
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.0 bits (52), Expect = 3.7
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 195 VISLYCGTSLYSFSYV-GLSNNTWLFNLSRTFPLDHFFFLALPPP 64
V+ + C +L F ++ G+ N T P +F+ L PPP
Sbjct: 37 VVVIICIAALIFFFFIIGIINRRRTKKGQATIPFTNFYPLTAPPP 81
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 25.0 bits (52), Expect = 3.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 357 HSLCDWIIALGRTRVDHLPMVLDYLFDETFFPKFVSALL 241
+S C +++AL TRV +++ FD PK + A++
Sbjct: 522 NSFCVFLVAL--TRVVSFALLIPIAFDLAIIPKVIIAII 558
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 25.0 bits (52), Expect = 3.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 6 GREGFGPNSLKKHRRRRKDPVAAKPRRRSGPKE 104
G+ G G L ++ DP+ PRR S K+
Sbjct: 272 GKNGSGELGLSNDELKKDDPIQITPRRISAFKD 304
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 24.6 bits (51), Expect = 4.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 226 PRFPGEKSTHELREKGLIKQVVQHHGQVIYTRATKGDDPV 345
P P + + E KG+I V++HG Y+ + +PV
Sbjct: 170 PNLPYDFNQPETSPKGIIMSAVRNHGCFQYSLHNEKLEPV 209
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 24.6 bits (51), Expect = 4.9
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 4 KDAKASXQTASKNTEEEGRIRWRQSQEEEVVQRKSS 111
K A+ + K EE + W++++EE+ + K +
Sbjct: 122 KKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKA 157
Score = 24.6 bits (51), Expect = 4.9
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 4 KDAKASXQTASKNTEEEGRIRWRQSQEEEVVQRKSS 111
K A+ + K EE + W++++EE+ + K +
Sbjct: 133 KKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKA 168
Score = 24.6 bits (51), Expect = 4.9
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 4 KDAKASXQTASKNTEEEGRIRWRQSQEEEVVQRKSS 111
K A+ + K EE + W++++EE+ + K +
Sbjct: 144 KKAREEDKAEWKKAREEDKAEWKKAREEDKAEWKKA 179
Score = 24.6 bits (51), Expect = 4.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 4 KDAKASXQTASKNTEEEGRIRWRQSQEEEVVQRKS 108
K A+ + K EE + W++++EE+ R S
Sbjct: 155 KKAREEDKAEWKKAREEDKAEWKKAREEDKEWRNS 189
>SPAC5H10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 89
Score = 24.2 bits (50), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 223 GPRFPGEKSTHELREKGLIKQV 288
GP FP E REKG I+ +
Sbjct: 12 GPDFPAPLEKKEKREKGKIRNI 33
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 24.2 bits (50), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 141 SNNTWLFNLSRTFPLDHFFFLAL 73
S N+W+F L TF F+L+L
Sbjct: 316 SRNSWIFTLLLTFTQLTIFYLSL 338
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 24.2 bits (50), Expect = 6.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 83 SWLCRHRILPSSSVFFEAVW 24
+WL + ++PSSS F + W
Sbjct: 131 AWLEKQELVPSSSNFLNSFW 150
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 23.8 bits (49), Expect = 8.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 149 TYEKLYKEVPQYKLITPAVVS 211
TY+K+Y E P K++ + S
Sbjct: 96 TYKKIYNEYPPTKILVQEIAS 116
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 23.8 bits (49), Expect = 8.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1
Query: 336 IALGRTRVDHLPMVLDYLFDETFFPKFVSALLAREPRTFNLSDTTAGVISLY 181
I LG+ + +VLD FD+ K +++L + R + + T + L+
Sbjct: 85 IRLGKVVPSSIRIVLDCAFDDLMNDKEINSLCQQVTRCHSANRTALHPVELF 136
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 23.8 bits (49), Expect = 8.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 197 PAVVSERLKVR-GSLARRALTNLGK--KVSSNR*SNTMG 304
P S+R+ V+ G R + + G SSNR SNTMG
Sbjct: 677 PPSTSKRISVQLGKKQARPVDSWGSTPNTSSNRNSNTMG 715
>SPBC409.06 |uch2||ubiquitin C-terminal hydrolase
Uch2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 23.8 bits (49), Expect = 8.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 1 RKDAKASXQTASKNTEEEGRIRWRQSQE 84
R+D + AS E+E R+RW++ +
Sbjct: 229 REDLTDEEKAASIAVEDEKRLRWKRENQ 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,543,943
Number of Sequences: 5004
Number of extensions: 30771
Number of successful extensions: 140
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 116121426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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