Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0815
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.91 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.91 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.91 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 73  VQTQITHTHVWAWKYYLITTA 135
           +Q  ++H H W W  +L++ A
Sbjct: 209 LQDFLSHQHAWIWLVWLLSQA 229


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 73  VQTQITHTHVWAWKYYLITTA 135
           +Q  ++H H W W  +L++ A
Sbjct: 442 LQDFLSHQHAWIWLVWLLSQA 462


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 73  VQTQITHTHVWAWKYYLITTA 135
           +Q  ++H H W W  +L++ A
Sbjct: 442 LQDFLSHQHAWIWLVWLLSQA 462


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 521 NLCAITPNV*PSC 483
           NL  ITPNV P+C
Sbjct: 131 NLADITPNVTPNC 143


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 521 NLCAITPNV*PSC 483
           NL  ITPNV P+C
Sbjct: 131 NLADITPNVTPNC 143


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  ITHTHVWAWKYYLIT 129
           I+H H W W  +L++
Sbjct: 459 ISHQHAWIWLLWLLS 473


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  ITHTHVWAWKYYLIT 129
           I+H H W W  +L++
Sbjct: 459 ISHQHAWIWLLWLLS 473


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  ITHTHVWAWKYYLIT 129
           I+H H W W  +L++
Sbjct: 459 ISHQHAWIWLLWLLS 473


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  ITHTHVWAWKYYLIT 129
           I+H H W W  +L++
Sbjct: 459 ISHQHAWIWLLWLLS 473


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 521 NLCAITPNV*PSC 483
           NL  ITPNV P+C
Sbjct: 131 NLADITPNVTPNC 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,691
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)