Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0815
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      70   7e-14
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        64   3e-12
EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.         23   7.9  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 69.7 bits (163), Expect = 7e-14
 Identities = 33/35 (94%), Positives = 34/35 (97%)
 Frame = -2

Query: 611 FQTDWRFQSAAIGALQEASEAYLVGLFEDTNLCAI 507
           F+TD RFQSAAIGALQEASEAYLVGLFEDTNLCAI
Sbjct: 79  FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAI 113



 Score = 50.8 bits (116), Expect = 3e-08
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -1

Query: 519 LVCYHAKRVTIMPKDIQLARRIRGERA 439
           L   HAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 LCAIHAKRVTIMPKDIQLARRIRGERA 136


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 64.5 bits (150), Expect = 3e-12
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = -2

Query: 611 FQTDWRFQSAAIGALQEASEAYLVGLFEDTNLCAI 507
           F+TD RFQS+A+ ALQEASEAYLVGLFEDTNLCAI
Sbjct: 77  FKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAI 111


>EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 551 AYLVG-LFEDTNLCAITPNV*PSCRRI 474
           AY+ G LF D ++C++  N  PS  RI
Sbjct: 93  AYVRGCLFNDKSMCSLIQNALPSEIRI 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,340
Number of Sequences: 2352
Number of extensions: 10586
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)