Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0810
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18) 52 3e-07
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20) 47 1e-05
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 44 7e-05
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 44 7e-05
SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05) 44 1e-04
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 42 5e-04
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 40 0.001
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 38 0.005
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_72| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 37 0.011
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 37 0.011
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 36 0.026
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 36 0.026
SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12) 36 0.026
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 36 0.034
SB_40390| Best HMM Match : BON (HMM E-Value=0.68) 35 0.046
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 35 0.060
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 34 0.080
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 34 0.080
SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15) 33 0.14
SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19) 33 0.14
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.14
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 33 0.24
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 33 0.24
SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16) 32 0.42
SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_24324| Best HMM Match : PDZ (HMM E-Value=0.013) 29 3.0
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_56060| Best HMM Match : CPSase_L_D2 (HMM E-Value=0) 28 5.2
SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09) 28 6.9
SB_32698| Best HMM Match : RuvB_N (HMM E-Value=2.6) 27 9.1
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Frame = +3
Query: 21 LGLQVAEGSD---GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ 191
+GL V G D G +YIK I G+PA+ C L GDQ++ VN + L+ + + ALE+L+
Sbjct: 2299 IGLMVIGGLDTPLGMLYIKDIQPGTPAEKCGHLRTGDQLLQVNDECLVGVTHAYALEVLK 2358
Query: 192 SAPQTVELIVLQNSQK 239
+ P V+L V + +
Sbjct: 2359 NTPPLVKLTVARKKDR 2374
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQ 236
+ ++ I GS D KL PGD++IS+NG++L N+ + AL +L+ V L++L++
Sbjct: 219 ITVRRILPGSVCDRNGKLQPGDRLISMNGESLTNVTHSTALHILKKPTDKVVLVILRDVH 278
Query: 237 KYSHISRLKLILVXQI 284
+ + + I V Q+
Sbjct: 279 DLTSEAANQNIAVAQV 294
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 18 ALGLQVAEGSDGN---VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELL 188
+LG+ V+ G N V ++ + A ++ GD+++SVNG++ + + + L LL
Sbjct: 2516 SLGIHVSGGVGTNCIDVTVRHVVPLGVAAKDGRIRKGDRVLSVNGRSTKGLTHQEVLNLL 2575
Query: 189 QSAPQTVELIVLQNS 233
Q+ P+ V L+V +++
Sbjct: 2576 QNLPRRVVLVVSRSN 2590
Score = 37.9 bits (84), Expect = 0.006
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 24 GLQVAEGSDGNVYIKSITSGSPADACKK----LLPGDQIISVNGKTLLNIKYDKALELLQ 191
G V EG V+IKS+ SG AD + L PGD+I+ VNG L + + +++ +
Sbjct: 31 GSTVVEG----VFIKSVASGKSADQAQSVSGGLRPGDEILEVNGTFLRYMDQEDVIKIFR 86
Query: 192 SAPQTVELIVLQNSQ 236
P T + V + Q
Sbjct: 87 DLPVTTIMKVNRAKQ 101
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/72 (38%), Positives = 48/72 (66%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
LG + ++ D +++KS+T GS A +L GD+I++VNG +L + ++ A+ L++AP
Sbjct: 984 LGGENSQRLDLGIFVKSVTEGSVAFKDGRLKAGDRILAVNGTSLEQVSHEYAVMQLKTAP 1043
Query: 201 QTVELIVLQNSQ 236
VEL+VLQ+ Q
Sbjct: 1044 TLVELVVLQSQQ 1055
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Frame = +3
Query: 15 NALGLQVAEGSD-----GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKAL 179
++LGL V+ G + G +Y+KS+ PAD K+ GD+I+ VNG +L+ + + +A+
Sbjct: 1262 SSLGLSVSGGVNTTVKLGGIYVKSLMLNGPADRNGKIRIGDRILEVNGVSLVGVTHKQAV 1321
Query: 180 ELLQSAPQTVELIVLQNSQ 236
E+++ APQ L++ ++ Q
Sbjct: 1322 EIIKRAPQRCRLVIDRSIQ 1340
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
+GL + EG G + + + G PA L GD+II + GK + + + A + L +A
Sbjct: 1781 IGLILREGEGGKILVDDVVPGEPAAQQGNLKHGDRIIEIGGKKVDGVGFLVARQYLDAAR 1840
Query: 201 QTVELIV 221
V+L+V
Sbjct: 1841 PVVQLVV 1847
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +3
Query: 12 MNALGLQVAEGSD------GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDK 173
+ LGL + G D G + IK + G PA KL GD I VNGK+L N +
Sbjct: 1369 IGGLGLSLVGGRDSDPEHGGLLRIKKMFPGQPATLSGKLQVGDIIQEVNGKSLANASHQD 1428
Query: 174 ALELLQSAPQTVELIV 221
A+ +++ V+L++
Sbjct: 1429 AINIIRQESPAVQLLI 1444
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVEL 215
++IK+I+ GS A+ +L GDQI+ VNG+ + + + + + +L+ TV+L
Sbjct: 1935 IFIKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMSHARVIGMLRKISTTVDL 1987
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 21 LGLQVAEGSD--GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQS 194
LG +A G+D G +++ + G PA + +L GDQI+ V+ + +K+ A+ +L++
Sbjct: 1684 LGFTLAGGADTMGGCFVRDVI-GDPAKSDGRLQKGDQILQVDDVDISEMKHMAAVNVLRA 1742
Query: 195 APQTVELIVLQ 227
+ V L VL+
Sbjct: 1743 TKKHVRLEVLR 1753
>SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18)
Length = 124
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 21 LGLQVAEG-SDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSA 197
LG+ + G S G +YIK + G A C +L D I+ VNGK+L + Y +AL +L++
Sbjct: 20 LGMSLTGGESGGPIYIKRLVPGGSAALCGQLQVNDVILQVNGKSLDRLTYREALSILRNC 79
Query: 198 PQTVELIV 221
P V L+V
Sbjct: 80 PPEVRLLV 87
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 30 QVAEGSD-GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQT 206
QV G V+++ + PAD L GDQI+SVNG +LN Y + +EL+Q + +
Sbjct: 177 QVRRGKPMDTVFVRQVAPNGPADKAG-LSSGDQIVSVNGNQVLNRTYSQVIELIQKSVEQ 235
Query: 207 VELIVL 224
VEL V+
Sbjct: 236 VELGVI 241
>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
Length = 285
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQ 236
V+I SIT PAD L PGD +++VN ++L+ +++ +A+ +L+S TV L V ++ +
Sbjct: 176 VFIVSITPNGPADKHGGLRPGDILLAVNDRSLVGLEHSQAVRILKSVSGTVRLTVKKSRE 235
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQ 236
+YIK + PA +L GDQ+I+VNG++L+ + +KA E + + V L +++
Sbjct: 1007 IYIKQVVKDGPAAKDGRLQAGDQLIAVNGESLIGVSQEKAAECMVRSGANVTLRIVKQGA 1066
Query: 237 KYSHISRL 260
Y ++ L
Sbjct: 1067 IYHGLATL 1074
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 RXQMNALGLQVAEGSDGN---VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDK 173
R +LGL VAE ++++++ GSP+ L GD+++ +NG ++ + +
Sbjct: 149 RAPNGSLGLVVAEEKGFQKPAMFVRNVIPGSPSAEGGVLERGDEVVGINGVNTEDMTHQQ 208
Query: 174 ALELLQSAPQTVELIVLQNS 233
A++L++S+P ++L +++NS
Sbjct: 209 AMDLIKSSPGKIDLKIVKNS 228
Score = 34.7 bits (76), Expect = 0.060
Identities = 14/52 (26%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +3
Query: 84 SPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ-SAPQTVELIVLQNSQ 236
+P L PGD+I+ +NGK++ +++A+ L++ + ++L +++NS+
Sbjct: 547 APPSQVGGLEPGDEIVGINGKSIKGKSHEEAMNLIRHTQGHQIDLTIVKNSR 598
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 21 LGLQVAEGS-------DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKAL 179
LG +A GS D +YI I G A +L GD+IISVN + L ++ ++ A+
Sbjct: 26 LGFSIAGGSGNQHVPGDNGIYITKIIEGGAAQQDGRLQVGDKIISVNLQNLEDVSHEDAV 85
Query: 180 ELLQSAPQTVELIVLQNSQKYS 245
++L++ + V ++V + + YS
Sbjct: 86 QVLKATKERVTIVVSRLTAYYS 107
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 21 LGLQVAEGSDG---NVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ 191
LGL + G+D N Y+ I S A C + GD+++ VNG L + AL + +
Sbjct: 132 LGLVLVGGADSPLKNHYVSDILPNSCASKCDCVRIGDELLEVNGHKLSGRTHADALTIFR 191
Query: 192 SAPQTVELIVLQN 230
S P ++L+V +N
Sbjct: 192 SLPSVIKLVVFRN 204
>SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05)
Length = 84
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQN-- 230
++I I A+ +L GD+++S+N + + N K+D A+ +L S P V LIV ++
Sbjct: 2 IFISKIAKDGTAERDGRLKVGDKVLSINSRDMKNAKHDDAVNMLTSGPSFVTLIVYRDRV 61
Query: 231 -SQKYSHISRLK 263
++K + +S+++
Sbjct: 62 INKKMTPLSKIQ 73
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 RXQMNALGLQVAEGSDGNV--YIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKA 176
+ + LG+ + G + V I I G PA C L GD I++VNG L + K++ A
Sbjct: 251 KDKTEGLGISITGGKEHGVPILISEIHDGMPAARCGGLYVGDAILAVNGIDLQDAKHNDA 310
Query: 177 LELLQSAPQTVELIVL 224
+++L S + + VL
Sbjct: 311 VKILSSIHGEITMEVL 326
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +3
Query: 63 IKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQ 227
I I GSPAD C++L GD++++VNG +++ + + + ++ + +V L + Q
Sbjct: 919 IGRIIQGSPADRCRELYVGDKLVAVNGTSIVGMHHSDIVNTIKQSGLSVTLRIAQ 973
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 15 NALGLQVAEGSDGN--VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELL 188
+ G ++ G + N V I +I G+PA A +L GD+I+ V+G ++++ + + L+
Sbjct: 742 SGFGFRIVGGKEDNTQVAIGTIVDGTPAAADGRLRRGDEILYVDGVSVIDGYHRDVISLM 801
Query: 189 QSAPQ 203
+SA Q
Sbjct: 802 KSAAQ 806
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 63 IKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP--QTVELIVLQ 227
IKSI A KL GD +I VNG++++N + + + + QS P + +EL +++
Sbjct: 470 IKSIVPDGAAAKDGKLRTGDALIKVNGRSVVNKTHQEVVSMFQSMPTNEPIELDMIR 526
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/62 (22%), Positives = 36/62 (58%)
Frame = +3
Query: 48 DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQ 227
D +Y+ I G AD ++ GD+++ +NG++ ++ + A+ +++ + V L++ +
Sbjct: 1293 DMPIYVLKIAEGGVADLDGRIKVGDEVLEINGRSTQHMLHTDAISMIRGGSK-VRLVLRR 1351
Query: 228 NS 233
+S
Sbjct: 1352 SS 1353
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +3
Query: 12 MNALGLQVAEGSDG----NVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKAL 179
+N LGL + G++ +VY+ ++ GS A +L GDQ+++V G+TL+ + +++A
Sbjct: 99 VNGLGLCIVGGTNRPEGPHVYVDNMIDGSDAYRDNRLRRGDQLVTVAGETLVGVTHEQAK 158
Query: 180 ELL 188
LL
Sbjct: 159 SLL 161
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 9 QMNALGLQVAEGS----DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKA 176
++N LG+ + S DG +Y+ S+ G D ++ PGD ++ VN N+ D A
Sbjct: 608 KVNFLGISIVGQSNKKGDGGIYVGSVMKGGAVDLDGRVEPGDMLLQVNDVNFENMSNDDA 667
Query: 177 LELLQ 191
+ +L+
Sbjct: 668 VRVLR 672
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 RXQMNALGLQVAE-GSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKAL 179
+ ++ LG V E S V I I GS A+ L PGD I+ VNGK++ + A+
Sbjct: 12 KRKVGGLGFLVKERASKPCVEISDIVKGSAAEGVSNLQPGDIILEVNGKSIEESHFKDAV 71
Query: 180 ELL 188
++L
Sbjct: 72 DVL 74
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
V ++S+ GSPA A +L PGD I+ +NG + N + +ELL+ + L+V
Sbjct: 484 VCVRSVDKGSPA-AQARLKPGDHILEINGLNVRNKTHAHVVELLKGSGSQPTLLV 537
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
V ++ + GSPA A +L PGD I+ +NG + N + +ELL+ + L+V
Sbjct: 316 VCVRLVDKGSPA-AQARLKPGDHILEINGLNVRNKTHAHVVELLKGSGSQPTLLV 369
>SB_72| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSA 197
LG+ + E +G +Y+ + + A L PGDQ+++V G +L+ I ++A + L+ A
Sbjct: 177 LGIAIEE-RNGGIYVNHVNTEGSAAQSGALYPGDQLLNVEGTSLIGISLEQAHKELKEA 234
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +3
Query: 30 QVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTV 209
+ A+G + + ++ I +G A KL D+I+ VNG+ L+++ +A E+ SA ++
Sbjct: 20 KTADGREIGLIVREIAAGKCASRNGKLQVADRILEVNGQNLMDLSNSRAQEVFDSAIRS- 78
Query: 210 ELIVLQNSQKYSHIS 254
+I L S S +S
Sbjct: 79 PVIKLAVSASSSFVS 93
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 42 GSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
G +++KSI + A +L GDQII VNG + +A+ +L+S V+L++
Sbjct: 193 GGHTPIFVKSILAKGAAIEDGRLRGGDQIIEVNGMPMTGKNQGEAVNILRSTEGVVKLLI 252
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 48 DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVEL 215
D +++KS+ +G A +L DQ++SVN + + + +A++ L+ A Q L
Sbjct: 318 DMGIFVKSVIAGGAAFKDGRLKAEDQLLSVNNVSFMRLTNTEAIDGLRRAMQNTRL 373
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 24 GLQVAEGSD---GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQS 194
GL +A G ++I + SG PA+ ++ D+I+ VN + + + +A +L++
Sbjct: 1517 GLSIAGGKGVAVNRIFIVDVKSGGPAEQDGRIKQADEILEVNRTPVRGMSHYQASTVLKN 1576
Query: 195 APQTVELIVLQNSQKYSHISRLK 263
+VEL + ++ + ++SR +
Sbjct: 1577 TGTSVELALGRSREAAEYLSRTR 1599
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQN 230
++IKSI GS A +L DQII V +L +A+E+L+ V L V ++
Sbjct: 657 IFIKSIAHGSTAALDGRLRVNDQIIQVGSVSLHGKNNGEAVEILKQTGPVVSLKVARH 714
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 117 GDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
GD +I VNG +L++ +++ + L+QS P L+V
Sbjct: 848 GDHLIEVNGVGVLDLGHNEVVTLIQSLPMEFRLVV 882
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ 191
+ I+S+ G A+ L PGD+++SVN L + D A++ L+
Sbjct: 977 IVIRSLVHGGVAEQDGSLHPGDRLMSVNEVNLEHASLDFAVQTLK 1021
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 18 ALGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSA 197
ALGL + + G ++K I GS AD ++ GD + +NG+ ++ ++ +L+
Sbjct: 282 ALGLTITDNGAGCAFVKRIKEGSIADKTPQICIGDHVEYINGQYVVGSRHFDVARMLREV 341
Query: 198 PQT 206
T
Sbjct: 342 DVT 344
>SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +3
Query: 15 NALGLQVAEGSDG-------NVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDK 173
+ LG +A G+D +YI + G A +L D I+SVNG ++I++ +
Sbjct: 169 SGLGFSIAGGTDNPHVDDDFGIYITKVIPGGAAAQDGRLQVNDCILSVNGTNTVDIEHQQ 228
Query: 174 ALELLQSAPQTVEL 215
A++ L++A V L
Sbjct: 229 AVDALKAAGSQVTL 242
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLN-IKYDKALELLQSAPQTVELIVLQNS 233
+++KS+ G+ + K+LPGD+I+SVNG + N I+ L + ++ +TV+ + + S
Sbjct: 143 IFVKSVMPGTHSYG--KVLPGDRILSVNGVNIANAIRKQAKLIISKAMSRTVQFTIKRAS 200
Query: 234 QK 239
++
Sbjct: 201 KR 202
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
LG V + DG V I I G A+ L GD+I+ +NG + + ELL
Sbjct: 457 LGATV-KNEDGAVLIGRIVKGGAAEKSGLLHEGDEILEINGVHMKGKSVSEVCELLADMN 515
Query: 201 QTVELIVLQNSQKYSHISRLKLILVXQIF 287
T+ +++ ++ +SR + + V F
Sbjct: 516 GTLTFLLVPKTRSIGTLSRDRAVHVRANF 544
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 63 IKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKAL 179
I SI GSPA+ L GD+I+ VNG ++ N + + +
Sbjct: 70 IDSIAQGSPAERAN-LRIGDEILEVNGTSVENFSHAEVI 107
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 3 RXQMNALGLQVAEGSDGNV--YIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKA 176
R Q G + GS+ V Y+ SI +GS ++A LLPGD I++VN + +D+A
Sbjct: 1249 RPQNCGFGFCMRGGSEHGVGLYVSSIDTGSVSEAIG-LLPGDHILAVNDVNFDGLTHDQA 1307
Query: 177 LEL 185
+++
Sbjct: 1308 VKV 1310
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 21 LGLQVAEGSDGN--VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQS 194
LGL++ G++ +YI + S A L GDQI+ VNG + LNI + A++ L++
Sbjct: 1320 LGLKIRGGAEYGLGIYIAGVDEHSAASRAG-LKCGDQIMDVNGTSFLNISHASAIKALKA 1378
>SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12)
Length = 217
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSA- 197
LGL+V + G +++ + SPA A L GDQI+ ++G+ + DKA++ L++A
Sbjct: 55 LGLRVRAVNKG-IFVAFVHKDSPA-ALGGLRFGDQILQIDGENMAGFDTDKAMKRLKNAS 112
Query: 198 PQTVELIV 221
PQ V V
Sbjct: 113 PQRVVFAV 120
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +3
Query: 72 ITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQKYSH 248
IT G AD + L GD+++++NG ++ + +A+E ++ + Q+V L + + S H
Sbjct: 2 ITPGGKADQTRVLDVGDEVVAING--MICVARSEAIEQIRCSRQSVRLTIKRGSSDVRH 58
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 35.5 bits (78), Expect = 0.034
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 54 NVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
++Y+ + PA L PGD+I+ VNG L N +D+A+ L++ Q V+L+V
Sbjct: 560 SIYVTKVQPEGPA--AFGLKPGDKILEVNGINLRNTTHDRAVLFLKN-NQVVDLLV 612
>SB_40390| Best HMM Match : BON (HMM E-Value=0.68)
Length = 561
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 108 LLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQKYSHISRLKLILVXQ 281
LL + +++NG ++ D A+ELLQ A + V LIVL+N+ + + I+ + + V Q
Sbjct: 268 LLVQKEAVTINGYSVRATSIDHAVELLQIAKKKVSLIVLKNALQNAVINNVDVRNVPQ 325
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 35.1 bits (77), Expect = 0.046
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +3
Query: 48 DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQ 227
D + +I I+ GS A L GD+I+ VNG+++ N+ + +LL TV L VL+
Sbjct: 812 DNSKFISFISPGSTAALNPMLAIGDKIVEVNGQSVENLSQLETEKLL--CTSTVSLAVLK 869
Query: 228 NSQKYSHISRLKLILVXQI 284
K +H+++ L+ ++
Sbjct: 870 --PKSAHLTQAMQSLLEEV 886
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 35.1 bits (77), Expect = 0.046
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +3
Query: 117 GDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
GDQ++SVNG ++ ++KA++LL+ A +V L+V
Sbjct: 579 GDQLLSVNGVSVEGENHEKAVDLLKEAQGSVRLVV 613
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 35.1 bits (77), Expect = 0.046
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 81 GSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQ 236
G + K +LPGD++I VNG + +I +K +E++ + + V + VL S+
Sbjct: 210 GIGPNTVKGILPGDRLIEVNGTNVEDIDREKIIEMIAMSGEEVVIKVLPVSE 261
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 42 GSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ 191
G V++ IT GS D L GD+I+ VNG L + + L+Q
Sbjct: 135 GRKDGVFVSRITPGSLVDCDGSLAVGDEILEVNGVCLAGFRVHDVVHLIQ 184
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 34.3 bits (75), Expect = 0.080
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +3
Query: 42 GSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
G + +Y+K I+ G A K L GD I+ +NGK L I ++++ + ++ +
Sbjct: 498 GFECGLYVKDISFGGVASEQKSLEIGDYILKMNGKHLDKIIASSIEKVIKKSGDKMKFHI 557
Query: 222 LQNSQKYSHISRLKLILV 275
+ Q S K++LV
Sbjct: 558 TRMIQASSRHGTSKVVLV 575
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 34.3 bits (75), Expect = 0.080
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELI 218
+YIK++ G A A +L G +++SVNG + ++ + +AL+ ++ + V I
Sbjct: 543 IYIKNVLPGGAAAADGRLRRGYEVLSVNGTDMTSVTHREALDFFKNIRRGVVTI 596
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 51 GNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSA 197
GN I I S A + +L GD+I+++NGK L ++ L SA
Sbjct: 76 GNARISEIQPKSLAFSDGRLTVGDKILAINGKDLSKASVERTRLYLNSA 124
>SB_31410| Best HMM Match : PDZ (HMM E-Value=1.1e-15)
Length = 556
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 21 LGLQVAEGSDGN--VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQS 194
LG + G + VYI + S S A+ + L GDQII VNG I + A+ LL S
Sbjct: 141 LGFSIRGGREHGCGVYISQVDSDSQAEK-QGLHLGDQIIEVNGIDFEQIAQNSAINLLSS 199
Query: 195 APQTVELIVLQNSQ 236
+ ++L++ Q
Sbjct: 200 LSK-MKLVIRTGEQ 212
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 117 GDQIISVNGKTLLNIKYDKALELLQS 194
GDQI++VN K+ NIK+ +A++ ++S
Sbjct: 218 GDQILNVNDKSFENIKHKEAVDFIKS 243
>SB_12379| Best HMM Match : PDZ (HMM E-Value=4.7e-19)
Length = 129
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
+G+QV G+ +++ + G+PA + L GD+I+ N +I ++A+ +L S
Sbjct: 43 IGIQVQGGNKHGIFVAGVREGNPAHR-QGLRRGDKILMANDIDFKDITREEAVLILLSLG 101
Query: 201 QTVELIVLQNSQKY 242
V L+ +++
Sbjct: 102 DEVSLLYQPRQREF 115
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQ 227
+++KS+T G A+ ++ DQII V+G +L+ + A L+ TV + L+
Sbjct: 676 IFVKSLTEGGAAEKDGRIQVNDQIIEVDGVSLVGVTQMFAAVTLKHTSGTVRYVHLR 732
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
+G+QV G+ +++ + G+PA + L GD+I+ N +I ++A+ +L S
Sbjct: 934 IGIQVQGGNKHGIFVAGVREGNPAHR-QGLRRGDKILMANDIDFKDITREEAVLILLSLG 992
Query: 201 QTVELIVLQNSQKY 242
V L+ +++
Sbjct: 993 DEVSLLYQPRQREF 1006
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +3
Query: 57 VYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVLQNSQ 236
+YIK + A ++ PGD I+ +N K ++K A++ ++++ +EL++++
Sbjct: 488 LYIKEVDPTGIAFYEGEIDPGDIILKINDKKADSLKLRDAIDEVRNSKDQLELVIVKTKG 547
Query: 237 KYSHISRLKL 266
+ +S L
Sbjct: 548 ENLSLSTRSL 557
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 48 DGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIV 221
D ++++++ SPA KL PGD+I+SVNG+ + + +++ A V V
Sbjct: 324 DPGIFVQAVKKDSPAYG--KLYPGDRILSVNGERVTRVPRKYVEVMIKMAEGVVRFYV 379
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 45 SDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQSAP 200
S G + I + SPA L PGDQI+ VNG ++ +++ ++L+ +P
Sbjct: 295 SQGPCVLSCILASSPAHKAG-LKPGDQILYVNGSSVERHPHEQVVKLIARSP 345
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 108 LLPGDQIISVNGKTLLNIKYDKALELLQSAPQT--VELIVLQNSQKYSHISRL 260
L GD ++ NG++++ + DKA+ +L+ +T L++ ++SQ + L
Sbjct: 270 LQEGDHLLEANGESMVGVTNDKAIAILRKVAETNQARLVISRDSQSREEFASL 322
>SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16)
Length = 270
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 RXQMNALGLQVAEGSD--GNVYIKSITSGSPADACKKLLPGDQIISVNGKTL 152
+ + N +G+ + G+ +Y+ + +PA L GD+I+ VNGK+L
Sbjct: 24 KDKQNLIGISIGGGAPLCPCLYVVQVFDNTPASKDGTLQAGDEIVGVNGKSL 75
>SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1981
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 21 LGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVN 140
L + V EGS+G V + ++ G A +LLPGD++++++
Sbjct: 1498 LRILVKEGSNG-VMVNAVLEGGDAGLDGRLLPGDRLLAID 1536
>SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 114 PGDQIISVNGKTLLNIKYDKALELLQSAPQTVELIVL 224
PGD I+SV + + + + LLQ AP ++ L+V+
Sbjct: 438 PGDIIVSVENRDVEEEDHRVLVSLLQEAPVSIRLVVV 474
>SB_24324| Best HMM Match : PDZ (HMM E-Value=0.013)
Length = 406
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 12 MNALGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALELLQ 191
+N + + G + I+ G P + K G I VNG +LL + +A+ L+
Sbjct: 134 LNDVNFHKSPGEKLGISIRGGAKGHPGNPLDKTDEGIFISKVNGVSLLGATHLEAVRALR 193
Query: 192 SAPQTVELIV 221
S V L+V
Sbjct: 194 SMGDRVTLLV 203
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 18 ALGLQVAEGSDGNVY----IKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYDKALEL 185
ALG+ + E G++ I + PA ++ GDQI+SVN +L+ + + +
Sbjct: 246 ALGVMIVESGWGSMIPTAIIAHLAKDGPAAKSGRVNVGDQILSVNNTSLVGLPLPECQNV 305
Query: 186 LQSA 197
++++
Sbjct: 306 IKNS 309
>SB_56060| Best HMM Match : CPSase_L_D2 (HMM E-Value=0)
Length = 1006
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 30 QVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLNIKYD 170
+V E VY +TS D K+ P ++S+ G+T LN D
Sbjct: 437 EVGEKQADTVYFVPVTSEFIEDVIKRERPDGVLLSMGGQTALNCGVD 483
>SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09)
Length = 712
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 63 IKSITSGSPADACKKLLPGDQII 131
+K +T SP D CK+ L GD +I
Sbjct: 223 MKKLTCQSPDDTCKRGLSGDSVI 245
>SB_32698| Best HMM Match : RuvB_N (HMM E-Value=2.6)
Length = 157
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 3 RXQMNALGLQVAEGSDGNVYIKSITSGSPADACKKLLPGDQIISVNGKTLLN 158
R ++ +GL+V E +G+ + S K L D+IIS+N K LLN
Sbjct: 37 RWKVLNMGLRVFEHINGDYKMPYRFSQEACHLLLKHLSSDRIISLNKKDLLN 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,167,879
Number of Sequences: 59808
Number of extensions: 319269
Number of successful extensions: 1531
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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