Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0806
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.76 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 PHGSTFRLGADSGRFSQCCSRPPCEQR 206
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 110 LSVLVASWINISAWG*LRKIFSVL 181
           LSV+ +S+++I+ W  L K F  +
Sbjct: 488 LSVIKSSFLDINTWKMLVKSFDAI 511


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 527 PSTAGGTSWVRLQTTHHLKTAGTPQIQPY 441
           P + G + +   Q  HH   A  PQ  PY
Sbjct: 40  PLSLGMSPYASSQHHHHHLQARPPQDSPY 68


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 414 LVATLCRMAVRLNLWSPGC 470
           LV  L +  + +++WSP C
Sbjct: 222 LVWLLSQAWISVHIWSPNC 240


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 414 LVATLCRMAVRLNLWSPGC 470
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 414 LVATLCRMAVRLNLWSPGC 470
           LV  L +  + +++WSP C
Sbjct: 455 LVWLLSQAWISVHIWSPNC 473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,615
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)