Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0806
(547 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 66 2e-11
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 63 2e-10
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 60 2e-09
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 60 2e-09
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 58 5e-09
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 58 5e-09
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 56 1e-08
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 39 0.002
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_32884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/80 (40%), Positives = 51/80 (63%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+++ PEEIS+K G I ++GKH+ + + GY + +F R Y LPDG +V SR++
Sbjct: 45 LDVKNYRPEEISLKVEHGRIKIDGKHKSEGEH-GYETSEFHRSYNLPDGVDVSTVSSRIT 103
Query: 473 SDGXLSVIAPRKCRQQWKVN 532
DG L + A + Q+ +V+
Sbjct: 104 GDGLLHIEALKAEPQETEVS 123
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 416 RRYALPDGCTAESVESRLSSDGXLSVIAPR 505
R + LP +S+ SRL DG L + A R
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKR 190
Score = 22.2 bits (45), Expect(2) = 2.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 263 KSDXXKFQVNLDVQHFXPE 319
K D +F V LDV F P+
Sbjct: 137 KIDDKRFTVTLDVSSFSPD 155
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 DXXKFQV-NLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCT 445
D KFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LP+G
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 446 AESVESRLSSDGXLSVIAPRK 508
S+ +R++ DG L V A +K
Sbjct: 61 ESSISTRIAEDGMLHVEALKK 81
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = +2
Query: 224 SPCCRGSRPWPSXKSDXXKFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYIS 403
SP P+ K D KF + LDV F PEE+ VK + V + +E + + +
Sbjct: 82 SPPATTENKAPATKDDT-KFTLALDVSDFKPEEVDVKVYGHELSVRAR-QECEEHGFFTA 139
Query: 404 RQFTRRYALPDGCTAESVESRLSSDGXLSVIAPRKCRQQ 520
RQF R + LP +++ RL DG L + A ++ +Q
Sbjct: 140 RQFNRHFVLPREVDMDTLVPRLGKDGVLYIEADKRPLRQ 178
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/69 (39%), Positives = 46/69 (66%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALP+G A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 71 NHGQLHIEA 79
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFVLPREVDMDSL 156
Query: 458 ESRLSSDGXLSVIAPRK 508
+RL +G L A ++
Sbjct: 157 TTRLDKEGKLHFEAKKR 173
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/69 (39%), Positives = 46/69 (66%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALP+G A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEGVEASNVKTRIS 70
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 71 NHGQLHIEA 79
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFVLPREVDMDSL 156
Query: 458 ESRLSSDGXLSVIAPRK 508
+RL +G L A ++
Sbjct: 157 TTRLDKEGKLHFEAKKR 173
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP+G A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 71 NHGQLHIEA 79
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP+G A +V++R+S
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEGVEASNVKTRIS 304
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 305 NHGQLHIEA 313
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFVLPREVDMDSL 156
Query: 458 ESRLSSDGXLSVIAPRK 508
+RL +G L A ++
Sbjct: 157 TTRLDKEGKLHFEAKKR 173
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + Y + F R++ LP +S+
Sbjct: 332 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFVLPREVDMDSL 390
Query: 458 ESRLSSDGXLSVIAPRK 508
+RL +G L A ++
Sbjct: 391 TTRLDKEGKLHFEAKKR 407
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 58.0 bits (134), Expect = 5e-09
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP+G A +V++R+S
Sbjct: 12 LDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEGVEASNVKTRIS 70
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 71 NHGQLHIEA 79
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESV 457
KF + +DV F P+ I V+ ++V HE + + Y + F R++ LP +S+
Sbjct: 98 KFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFVLPREVDMDSL 156
Query: 458 ESRLSSDGXLSVIAPRK 508
+RL +G L A ++
Sbjct: 157 TTRLDKEGKLHFEAKKR 173
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LP+G E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRHVNE-GEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 71 NHGHLHIEA 79
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 263 KSDXXKFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGC 442
K+ KF + +DV F PE I V+ ++V HE + + Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVE-HEGHYHAMHFNRQFVLPREV 150
Query: 443 TAESVESRLSSDGXL 487
+S+ +RL +G L
Sbjct: 151 DMDSLTTRLDKEGKL 165
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +2
Query: 293 LDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLS 472
LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LP+G A +V++R+S
Sbjct: 13 LDVREYRPEEISFKVENGVVKVQGRHVNE-GPFGFELKEFRRTFTLPEGVEASNVKTRIS 71
Query: 473 SDGXLSVIA 499
+ G L + A
Sbjct: 72 NHGQLHIEA 80
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/82 (29%), Positives = 42/82 (51%)
Frame = +2
Query: 263 KSDXXKFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALPDGC 442
+S KF + +DV+ F PE I V+ ++V HE + + Y + F R++ LP
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVE-HEGHYHAMHFNRQFILPREV 151
Query: 443 TAESVESRLSSDGXLSVIAPRK 508
+S+ +RL +G L A ++
Sbjct: 152 DMDSLTTRLDKEGKLHFEAKKR 173
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 269 DXXKFQVNLDVQHFXPEEISVKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALP 433
D KF + LDV F PEE+ VK + V + +E + + +RQF R + LP
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRAR-QECEEHGFFTARQFNRHFVLP 77
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 521 TAGGTSWVRLQTTHHLKTAGTPQIQPYSHPAKR 423
T+ S ++ +T L+ AG PQ+ P SHP R
Sbjct: 754 TSSTLSPCKMSSTSGLRIAGGPQLPPVSHPGIR 786
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 329 VKTADGYIVVEGKHEEKXDQXGYISRQFTRRYALP 433
+++A GY+V G H K + G + + R LP
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLP 44
>SB_32884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 5.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 487 VCNRTQEVPPAVEGERKIP 543
+C RT ++PPA++ E +P
Sbjct: 66 ICQRTSDIPPALQHENTLP 84
>SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 18 TSEKSLQNLVSIFT--NLQQQNVVDSVVIXLRN*ASSSPHGSTFRLGADSGRFSQCCSRP 191
T + SL + + T N +Q+ +V RN +S+PHGS L + + +
Sbjct: 399 TKDTSLHKVTTDNTSSNSDKQSEKCNVNGHTRNSRNSTPHGSKMNLHSSQTELNPVYNSS 458
Query: 192 PCEQRILPPVGHLAAAARDLGPA 260
P I P L + +L P+
Sbjct: 459 PTLTEITPSSPELTPISSELAPS 481
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,471,859
Number of Sequences: 59808
Number of extensions: 319162
Number of successful extensions: 786
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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