Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0806
(547 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 39 0.002
At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS... 38 0.004
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 35 0.031
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 34 0.071
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 32 0.29
At1g78910.1 68414.m09199 pseudouridine synthase family protein l... 31 0.66
At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein (HS... 31 0.66
At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.5
At1g34180.1 68414.m04239 no apical meristem (NAM) family protein... 27 6.2
At4g37100.1 68417.m05255 hypothetical protein 27 8.2
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +2
Query: 296 DVQHFXPEEISVKTADGYIV-VEGK----HEEKXDQXGYISR---QFTRRYALPDGCTAE 451
D+ EE+ V+ DG I+ + G+ +EEK D+ + R +FTRR+ LP+ E
Sbjct: 66 DLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKME 125
Query: 452 SVESRLSSDGXLSVIAPR 505
+++ + +G LSV P+
Sbjct: 126 EIKASM-ENGVLSVTVPK 142
>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
(HSP17.4-CI) identical to 17.4 kDa class I heat shock
protein SP:P19036 from [Arabidopsis thaliana]
Length = 156
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +2
Query: 296 DVQHFXPEEISVKTADGYIV-VEGK----HEEKXDQXGYISR---QFTRRYALPDGCTAE 451
DV EE+ V+ DG I+ + G+ +EEK D + R +F RR+ LP+ E
Sbjct: 65 DVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVE 124
Query: 452 SVESRLSSDGXLSVIAPR 505
V++ + +G LSV P+
Sbjct: 125 EVKASM-ENGVLSVTVPK 141
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 35.1 bits (77), Expect = 0.031
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Frame = +2
Query: 170 FSVLQPAPL*AENTTARGSPCCRGSRPWPSXKSDXXKFQVNLDVQHFXPEEISVKTAD-G 346
F +L+ PL E T+ R W K ++ LD+ +E+ ++ + G
Sbjct: 50 FKILERIPLGLERDTSVALSPARVD--W---KETAEGHEIMLDIPGLKKDEVKIEVEENG 104
Query: 347 YIVVEGKH----EEKXDQXGYISR---QFTRRYALPDGCTAESVESRLSSDGXLSV---- 493
+ V G+ E+K DQ + R +F R++ LPD ESV+++L +G L++
Sbjct: 105 VLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKL-ENGVLTINLTK 163
Query: 494 IAPRKCRQQWKVN 532
++P K + VN
Sbjct: 164 LSPEKVKGPRVVN 176
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 33.9 bits (74), Expect = 0.071
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +2
Query: 296 DVQHFXPEEISVKTADGYIV-VEGK----HEEKXDQXGYISR---QFTRRYALPDGCTAE 451
D+ EE+ V+ D ++ + G+ +EEK D+ + R +F RR+ LP+ E
Sbjct: 68 DLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKME 127
Query: 452 SVESRLSSDGXLSVIAPR 505
V++ + +G L+V+ P+
Sbjct: 128 EVKATM-ENGVLTVVVPK 144
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 31.9 bits (69), Expect = 0.29
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +2
Query: 296 DVQHFXPEEISVKTA-DGYIVVEG-KHEEKXDQXGYISR------QFTRRYALPDGCTAE 451
D+ EE+ V+ D + + G +H EK D+ R QFTRR+ LP+ +
Sbjct: 62 DLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMD 121
Query: 452 SVESRLSSDGXLSVIAPR 505
V++ + +G L+V P+
Sbjct: 122 QVKAAM-ENGVLTVTVPK 138
>At1g78910.1 68414.m09199 pseudouridine synthase family protein low
similarity to SP|P23851 Ribosomal large subunit
pseudouridine synthase C (EC 4.2.1.70) (Pseudouridylate
synthase) (Uracil hydrolyase) {Escherichia coli};
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 478
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -3
Query: 461 TPQIQPYSHPAKRSDE*IDAICNXADLXSPRVCLQPR--CSRPPF*QRFLPGRNAGRPGL 288
T I+ YS A I N A L P+ PR S PPF LPG+NAG G
Sbjct: 14 TVLIRRYSRVAPPPSSVIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKNAGADGD 73
Query: 287 LGTXPXH 267
G H
Sbjct: 74 DGDSGGH 80
>At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein
(HSP17.8-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]; contains Pfam
PF00011: Hsp20/alpha crystallin family
Length = 157
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = +2
Query: 296 DVQHFXPEEISVKTADGYIV-VEGKH----EEKXDQXGYISR---QFTRRYALPDGCTAE 451
D+ EE+ V+ D ++ + G+ EEK D + R QF+R++ LP+ +
Sbjct: 64 DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMD 123
Query: 452 SVESRLSSDGXLSVIAPR 505
V++ + +G L+V P+
Sbjct: 124 QVKASM-ENGVLTVTVPK 140
>At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/91 (27%), Positives = 39/91 (42%)
Frame = -2
Query: 393 PX*SXFSSCLPSTTM*PSAVLTEISSGXKCWTSRFTWNLXXSLXXLGQGLEPRQQGDPRA 214
P S C S + P+ +TEI+ + RF W + ++ G EP +G
Sbjct: 279 PDSSVLFLCFGSMGVFPAPQITEIAHALELIGCRFIWAIRTNMAGDGDPQEPLPEG---F 335
Query: 213 VVFSAHKGAGCSTEKIFRSQPQAEMLIHEAT 121
V + +G CS PQ ++L H+AT
Sbjct: 336 VDRTMGRGIVCSW------APQVDILAHKAT 360
>At1g34180.1 68414.m04239 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM-like protein GI:8809651 from (Arabidopsis
thaliana)
Length = 564
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 356 VEGKHEEKXDQXGYISRQFTRRYALPDGCTAESVESRLSSDGXLSVIAPR 505
+E E D G RQF +P G +AE ++S L ++ I PR
Sbjct: 229 IEKLLNEIPDAPGVNQRQFDEFVGVPQGNSAEVIQSTLLNNSSGEYIDPR 278
>At4g37100.1 68417.m05255 hypothetical protein
Length = 896
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 326 RFLPGRNAGRPGLLGTXPXHFXXWAKVSSRGSKVTH 219
R L GR+ GR LLG H +VS +V+H
Sbjct: 632 RLLGGRDGGRSRLLGVEDEHPSKGRRVSFNMERVSH 667
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,370,248
Number of Sequences: 28952
Number of extensions: 214355
Number of successful extensions: 506
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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