Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0805
         (449 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    28   3.0  
01_01_0231 + 1951047-1951499                                           27   5.3  
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457           27   5.3  
01_01_0229 - 1943473-1943922                                           27   5.3  
03_01_0491 + 3720842-3720958,3721904-3723109                           27   7.0  
11_03_0056 + 9373608-9374004,9374065-9374105                           27   9.2  
09_03_0156 - 12844549-12845138,12845237-12845723                       27   9.2  

>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 262 CWSKVSSRGIKLHATGGSIL 203
           C++ VSS G+ +H TGG+++
Sbjct: 781 CFNNVSSSGLSVHDTGGNVI 800


>01_01_0231 + 1951047-1951499
          Length = 150

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
 Frame = +1

Query: 298 DVQHFAPEEISVXTADGYI-VVEGKH----EDKXDQHGYISR---QFTRRYALPE 438
           D+     EE+ V   +G + V+ G+     EDK D+   + R   QF RR+ LPE
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 113


>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
          Length = 438

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
 Frame = +1

Query: 298 DVQHFAPEEISVXTADGYI-VVEGKH----EDKXDQHGYISR---QFTRRYALPE 438
           D+     EE+ V   +G + V+ G+     EDK D+   + R   QF RR+ LPE
Sbjct: 59  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 113


>01_01_0229 - 1943473-1943922
          Length = 149

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
 Frame = +1

Query: 298 DVQHFAPEEISVXTADGYI-VVEGKH----EDKXDQHGYISR---QFTRRYALPE 438
           D+     EE+ V   +G + V+ G+     EDK D+   + R   QF RR+ LPE
Sbjct: 58  DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPE 112


>03_01_0491 + 3720842-3720958,3721904-3723109
          Length = 440

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 201 AHKGSGCSTEKIFRSQPXAEMLIHEATRTLNFV 103
           A  G GC   K+F S+  A+   H A  +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423


>11_03_0056 + 9373608-9374004,9374065-9374105
          Length = 145

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 274 YQF*CWSKVSSRGIKLHATGGSILCSQGVR 185
           YQF  +  +  RG+K   TGG +L S+G+R
Sbjct: 116 YQFFLYQLL--RGLKYIHTGGGLLASEGIR 143


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 332 TEISSGAKCWTSRXTWNLS 276
           T+ SSGAK WT + +W  S
Sbjct: 308 TDASSGAKYWTIKNSWGQS 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,473,301
Number of Sequences: 37544
Number of extensions: 189744
Number of successful extensions: 382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)