BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0805 (449 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 53 1e-07 SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 50 1e-06 SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 47 6e-06 SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 46 1e-05 SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 46 1e-05 SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05 SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 44 6e-05 SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 43 1e-04 SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 42 3e-04 SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44 SB_37715| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 29 1.3 SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5 SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029) 27 9.5 >SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) Length = 210 Score = 53.2 bits (122), Expect = 1e-07 Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 4/70 (5%) Frame = +1 Query: 244 SRPCS---SIKIDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQ 411 +R CS + +++ DK ++ LDV+++ PEEIS+ G I ++GKH+ + +HGY + + Sbjct: 24 TRNCSLAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSE 82 Query: 412 FTRRYALPEG 441 F R Y LP+G Sbjct: 83 FHRSYNLPDG 92 >SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) Length = 185 Score = 49.6 bits (113), Expect = 1e-06 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = +1 Query: 268 IDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +D DKFQ+ LDV+ F PEEI+ +G I V G + ++ G+ S++F R Y LPEG Sbjct: 1 MDADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEG 58 Score = 40.7 bits (91), Expect = 5e-04 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 271 DKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYI-SRQFTRRYALP 435 D KF + LDV F PEE+ V + V + E ++HG+ +RQF R + LP Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLP 149 >SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) Length = 424 Score = 47.2 bits (107), Expect = 6e-06 Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Frame = +1 Query: 253 CSSIKIDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYA 429 C + + D+ ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R + Sbjct: 231 CRLVYLQLDELEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFT 289 Query: 430 LPEG 441 LPEG Sbjct: 290 LPEG 293 Score = 44.8 bits (101), Expect = 3e-05 Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = +1 Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R + LPEG Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 59 Score = 39.1 bits (87), Expect = 0.002 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148 Score = 39.1 bits (87), Expect = 0.002 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 382 >SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) Length = 190 Score = 46.4 bits (105), Expect = 1e-05 Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = +1 Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R +ALPEG Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEG 59 Score = 39.1 bits (87), Expect = 0.002 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148 >SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) Length = 190 Score = 46.4 bits (105), Expect = 1e-05 Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = +1 Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R +ALPEG Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEG 59 Score = 39.1 bits (87), Expect = 0.002 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148 >SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 760 Score = 44.8 bits (101), Expect = 3e-05 Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = +1 Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R + LPEG Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 59 Score = 39.1 bits (87), Expect = 0.002 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148 >SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) Length = 189 Score = 44.0 bits (99), Expect = 6e-05 Identities = 19/49 (38%), Positives = 32/49 (65%) Frame = +1 Query: 295 LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 LDV+ + PEEIS +G + V+G+H ++ + G+ ++F R + LPEG Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRHVNE-GEFGFELKEFRRTFTLPEG 59 Score = 41.9 bits (94), Expect = 2e-04 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +1 Query: 265 KIDKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 K +DKF + +DV F PE I V ++V HE + + H Y + F R++ LP Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLP 147 >SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) Length = 695 Score = 43.2 bits (97), Expect = 1e-04 Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Frame = +1 Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441 +++K ++ LDV+ + PEEIS +G + V+G+H ++ G+ ++F R + LPEG Sbjct: 4 NENKLEIAKLDVREYRPEEISFKVENGVVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 60 Score = 40.3 bits (90), Expect = 7e-04 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +1 Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435 DKF + +DV+ F PE I V ++V HE + + H Y + F R++ LP Sbjct: 97 DKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILP 148 >SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) Length = 259 Score = 41.5 bits (93), Expect = 3e-04 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1 Query: 271 DKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYI-SRQFTRRYALPE 438 D KF + LDV F PEE+ V + V + E ++HG+ +RQF R + LP+ Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPQ 78 >SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 163 Score = 31.1 bits (67), Expect = 0.44 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +1 Query: 262 IKIDKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQH 393 I +D D+F + D H +E+ + T + YI + H D+ + H Sbjct: 45 IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELHTDRNEIH 88 >SB_37715| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 29.9 bits (64), Expect = 1.0 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = +2 Query: 242 ARDLAPASKLIRXXXXXXXXXXXXPRKKSLSXRRTATSWLKANTRTXKIS 391 ARD AP + R P +S+S R T WLKAN R K++ Sbjct: 86 ARDPAPVNPRERAQTRSHTTCNKEPESESISLR-TVPVWLKANGRKVKVN 134 >SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) Length = 436 Score = 29.5 bits (63), Expect = 1.3 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 367 KHEDKXDQHGYISRQFTRRYAL 432 KHE++ D+HGY+ + T ++AL Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93 >SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 28.7 bits (61), Expect = 2.3 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = +1 Query: 331 VXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPE 438 + +A GY+V G H K + G + + R LP+ Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45 >SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 594 Score = 26.6 bits (56), Expect = 9.5 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Frame = +3 Query: 18 TSEKSLQNLVSIFT--NLQQQNXXXXXXXXLRN*ASSSPHGSTFRLXADSGRFSQCCSRT 191 T + SL + + T N +Q+ RN +S+PHGS L + + + + Sbjct: 399 TKDTSLHKVTTDNTSSNSDKQSEKCNVNGHTRNSRNSTPHGSKMNLHSSQTELNPVYNSS 458 Query: 192 PCEQRILP------PVACSLMPRLE 248 P I P P++ L P L+ Sbjct: 459 PTLTEITPSSPELTPISSELAPSLD 483 >SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029) Length = 1769 Score = 26.6 bits (56), Expect = 9.5 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 163 EDFLSAAAGPLVSREYYRPWRAA*CRGSRPCSSIKIDKDK 282 E + AA GP + RE+Y P +A R S ++I D+ Sbjct: 1179 EGIVEAAEGPSIGREFYIPHKAV-LRTQAESSKLRIVYDE 1217 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,555,147 Number of Sequences: 59808 Number of extensions: 205896 Number of successful extensions: 506 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 505 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 896151577 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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