Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0805
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 53 1e-07
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 50 1e-06
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 47 6e-06
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 46 1e-05
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 46 1e-05
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 44 6e-05
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 43 1e-04
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 42 3e-04
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_37715| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 29 1.3
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029) 27 9.5
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Frame = +1
Query: 244 SRPCS---SIKIDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQ 411
+R CS + +++ DK ++ LDV+++ PEEIS+ G I ++GKH+ + +HGY + +
Sbjct: 24 TRNCSLAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSE 82
Query: 412 FTRRYALPEG 441
F R Y LP+G
Sbjct: 83 FHRSYNLPDG 92
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 IDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+D DKFQ+ LDV+ F PEEI+ +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 1 MDADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEG 58
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 DKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYI-SRQFTRRYALP 435
D KF + LDV F PEE+ V + V + E ++HG+ +RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLP 149
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 CSSIKIDKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYA 429
C + + D+ ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R +
Sbjct: 231 CRLVYLQLDELEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFT 289
Query: 430 LPEG 441
LPEG
Sbjct: 290 LPEG 293
Score = 44.8 bits (101), Expect = 3e-05
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R + LPEG
Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 382
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R +ALPEG
Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEG 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R +ALPEG
Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFALPEG 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 44.8 bits (101), Expect = 3e-05
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+++K ++ LDV+ + PEEIS +G++ V+G+H ++ G+ ++F R + LPEG
Sbjct: 3 NENKLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV F P+ I V ++V HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLP 148
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +1
Query: 295 LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
LDV+ + PEEIS +G + V+G+H ++ + G+ ++F R + LPEG
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRHVNE-GEFGFELKEFRRTFTLPEG 59
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 265 KIDKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
K +DKF + +DV F PE I V ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLP 147
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQVX-LDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPEG 441
+++K ++ LDV+ + PEEIS +G + V+G+H ++ G+ ++F R + LPEG
Sbjct: 4 NENKLEIAKLDVREYRPEEISFKVENGVVKVQGRHVNE-GPFGFELKEFRRTFTLPEG 60
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 277 DKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALP 435
DKF + +DV+ F PE I V ++V HE + + H Y + F R++ LP
Sbjct: 97 DKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILP 148
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 DKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQHGYI-SRQFTRRYALPE 438
D KF + LDV F PEE+ V + V + E ++HG+ +RQF R + LP+
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPQ 78
>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 31.1 bits (67), Expect = 0.44
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 262 IKIDKDKFQVXLDVQHFAPEEISVXTADGYIVVEGKHEDKXDQH 393
I +D D+F + D H +E+ + T + YI + H D+ + H
Sbjct: 45 IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELHTDRNEIH 88
>SB_37715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ARDLAPASKLIRXXXXXXXXXXXXPRKKSLSXRRTATSWLKANTRTXKIS 391
ARD AP + R P +S+S R T WLKAN R K++
Sbjct: 86 ARDPAPVNPRERAQTRSHTTCNKEPESESISLR-TVPVWLKANGRKVKVN 134
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 367 KHEDKXDQHGYISRQFTRRYAL 432
KHE++ D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 331 VXTADGYIVVEGKHEDKXDQHGYISRQFTRRYALPE 438
+ +A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 26.6 bits (56), Expect = 9.5
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Frame = +3
Query: 18 TSEKSLQNLVSIFT--NLQQQNXXXXXXXXLRN*ASSSPHGSTFRLXADSGRFSQCCSRT 191
T + SL + + T N +Q+ RN +S+PHGS L + + + +
Sbjct: 399 TKDTSLHKVTTDNTSSNSDKQSEKCNVNGHTRNSRNSTPHGSKMNLHSSQTELNPVYNSS 458
Query: 192 PCEQRILP------PVACSLMPRLE 248
P I P P++ L P L+
Sbjct: 459 PTLTEITPSSPELTPISSELAPSLD 483
>SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029)
Length = 1769
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 163 EDFLSAAAGPLVSREYYRPWRAA*CRGSRPCSSIKIDKDK 282
E + AA GP + RE+Y P +A R S ++I D+
Sbjct: 1179 EGIVEAAEGPSIGREFYIPHKAV-LRTQAESSKLRIVYDE 1217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,555,147
Number of Sequences: 59808
Number of extensions: 205896
Number of successful extensions: 506
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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