Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0802
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p pro...   113   5e-26
AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB...   113   5e-26
AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA...   113   5e-26
U03289-1|AAA03464.1|  113|Drosophila melanogaster protein ( Dros...   111   3e-25
BT004851-1|AAO45207.1|  530|Drosophila melanogaster RE68504p pro...    28   3.3  
AE014297-1061|AAF54471.1|  530|Drosophila melanogaster CG5358-PA...    28   3.3  
AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p pro...    28   4.4  
AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC...    28   4.4  
AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB...    28   4.4  
AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA...    28   4.4  

>AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p
           protein.
          Length = 117

 Score =  113 bits (273), Expect = 5e-26
 Identities = 58/89 (65%), Positives = 65/89 (73%)
 Frame = +2

Query: 2   KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPPYEKLYQEVPQY 181
           KDAK+SAKQPQKTQ                    VRDKLNNQVLFDK  YEKLY+EVP Y
Sbjct: 5   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64

Query: 182 KLITPAVVSERLKVRGSLARRALIDLGKK 268
           KLITP+VVSERLK+RGSLA+RALI+L +K
Sbjct: 65  KLITPSVVSERLKIRGSLAKRALIELREK 93



 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 256 LREKGLIKQVVQHHGQVIYXRATKG 330
           LREKGLIKQVVQHH QVIY RATKG
Sbjct: 90  LREKGLIKQVVQHHSQVIYTRATKG 114


>AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB,
           isoform B protein.
          Length = 117

 Score =  113 bits (273), Expect = 5e-26
 Identities = 58/89 (65%), Positives = 65/89 (73%)
 Frame = +2

Query: 2   KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPPYEKLYQEVPQY 181
           KDAK+SAKQPQKTQ                    VRDKLNNQVLFDK  YEKLY+EVP Y
Sbjct: 5   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64

Query: 182 KLITPAVVSERLKVRGSLARRALIDLGKK 268
           KLITP+VVSERLK+RGSLA+RALI+L +K
Sbjct: 65  KLITPSVVSERLKIRGSLAKRALIELREK 93



 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 256 LREKGLIKQVVQHHGQVIYXRATKG 330
           LREKGLIKQVVQHH QVIY RATKG
Sbjct: 90  LREKGLIKQVVQHHSQVIYTRATKG 114


>AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA,
           isoform A protein.
          Length = 117

 Score =  113 bits (273), Expect = 5e-26
 Identities = 58/89 (65%), Positives = 65/89 (73%)
 Frame = +2

Query: 2   KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPPYEKLYQEVPQY 181
           KDAK+SAKQPQKTQ                    VRDKLNNQVLFDK  YEKLY+EVP Y
Sbjct: 5   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 64

Query: 182 KLITPAVVSERLKVRGSLARRALIDLGKK 268
           KLITP+VVSERLK+RGSLA+RALI+L +K
Sbjct: 65  KLITPSVVSERLKIRGSLAKRALIELREK 93



 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 256 LREKGLIKQVVQHHGQVIYXRATKG 330
           LREKGLIKQVVQHH QVIY RATKG
Sbjct: 90  LREKGLIKQVVQHHSQVIYTRATKG 114


>U03289-1|AAA03464.1|  113|Drosophila melanogaster protein (
           Drosophila melanogasterSevelin ribosomal protein homolog
           gene, partial cds. ).
          Length = 113

 Score =  111 bits (267), Expect = 3e-25
 Identities = 57/89 (64%), Positives = 64/89 (71%)
 Frame = +2

Query: 2   KDAKASAKQPQKTQXXXXXXXXXXXXXXXXXXXXVRDKLNNQVLFDKPPYEKLYQEVPQY 181
           KDAK+SAKQPQKTQ                    VRDKLNNQVLFDK  YEKLY+EVP Y
Sbjct: 1   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60

Query: 182 KLITPAVVSERLKVRGSLARRALIDLGKK 268
           KLITP+VVSERLK+RGSL +RALI+L +K
Sbjct: 61  KLITPSVVSERLKIRGSLDKRALIELREK 89



 Score = 50.8 bits (116), Expect = 5e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +1

Query: 256 LREKGLIKQVVQHHGQVIYXRATKG 330
           LREKGLIKQVVQHH QVIY RATKG
Sbjct: 86  LREKGLIKQVVQHHSQVIYTRATKG 110


>BT004851-1|AAO45207.1|  530|Drosophila melanogaster RE68504p
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 165 WYSFSYGGLSNNTWLFNLSRTXPXDHFFFXALPPPDPSF 49
           W+   + G S N WL + S T P  H++      P P F
Sbjct: 385 WFDVEFSGSSQNVWL-STSPTAPLTHWYQVRCLLPMPIF 422


>AE014297-1061|AAF54471.1|  530|Drosophila melanogaster CG5358-PA
           protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 165 WYSFSYGGLSNNTWLFNLSRTXPXDHFFFXALPPPDPSF 49
           W+   + G S N WL + S T P  H++      P P F
Sbjct: 385 WFDVEFSGSSQNVWL-STSPTAPLTHWYQVRCLLPMPIF 422


>AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p
           protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 9   RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
           R   P+S  + R R+  P++  PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152


>AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC,
           isoform C protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 9   RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
           R   P+S  + R R+  P++  PRRRS P
Sbjct: 84  RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 112


>AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB,
           isoform B protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 9   RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
           R   P+S  + R R+  P++  PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152


>AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA,
           isoform A protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 9   RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 95
           R   P+S  + R R+  P++  PRRRS P
Sbjct: 124 RSRSPHSRSRSRLRKSPPLSPPPRRRSPP 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,060,989
Number of Sequences: 53049
Number of extensions: 300222
Number of successful extensions: 796
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)