BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0801 (568 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0) 37 0.010 SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1 SB_321| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6 SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9) 27 8.1 SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1 SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1 >SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0) Length = 926 Score = 37.1 bits (82), Expect = 0.010 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +2 Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICPSDEDSKTFTINCASG 181 Q+RWF + G+LSYY + + RG +LA A I ED+ +F I+ Sbjct: 331 QRRWFVLS--NGLLSYYR-----NQAEMAHTCRGTINLAGAFI--DTEDACSFVISNGGT 381 Query: 182 DMLKLRATDARARQEWV 232 + LRA+ RQ WV Sbjct: 382 QVFHLRASTEVERQRWV 398 >SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 547 Score = 30.3 bits (65), Expect = 1.1 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Frame = +2 Query: 2 QQRWFAVDPETGVLSYYLYDGPGDTIQP------GQPARGEAHLAAAVICPSDEDSKTFT 163 Q+RW + E G+LSY+LY G T P Q A + V+C + ++ Sbjct: 280 QRRWCVL--EGGMLSYWLYPGDETTKAPLGSLDLSQCASSHVTTVSRVLC-ARPNTMELV 336 Query: 164 INCASGDMLK-LRATDARA-RQEWVD 235 IN + +K L A D +A + W+D Sbjct: 337 INKGDNNSIKYLLAADTKADKVTWLD 362 >SB_321| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 496 Score = 28.3 bits (60), Expect = 4.6 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 2 QQRWFAVDPETGVLSYYLY-DGPGDT-IQPGQPARGEAHLAAAVICPSDEDSKTFTINCA 175 Q+RWF ++ GVL Y++Y D G T IQ G H + + +TF+I Sbjct: 21 QRRWFVLN-SAGVLEYFIYDDSHGATDIQVGNI---NVHDCTNIFNGESDTGETFSIGLK 76 Query: 176 SGDM-LKLRATDARARQEW 229 S ++ L+A + W Sbjct: 77 SENVNYYLKAENRLEMDNW 95 >SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9) Length = 310 Score = 27.5 bits (58), Expect = 8.1 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +1 Query: 70 RHNTAWTAGQGGGSFSCSSDMPKRRRLQDLHH 165 RHN GS C D P+RRR+ HH Sbjct: 181 RHNNCSEYDVSYGSDECCHDHPERRRVGCSHH 212 >SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1297 Score = 27.5 bits (58), Expect = 8.1 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +1 Query: 103 GGSFSCSSDMPKRRRLQDLHHKLRVRRHVEAE 198 G FSC++ P L+DL+ + R RR VEAE Sbjct: 671 GVRFSCNAGQPLNDTLEDLNARRRDRR-VEAE 701 >SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1755 Score = 27.5 bits (58), Expect = 8.1 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 88 TAGQGGGSFSCSSDMPK-RRRLQDLHHKLRVRRHVEAE 198 ++GQGG + + +M + R+ QD HKL H E E Sbjct: 1268 SSGQGGANEAIIKEMEQLRQEQQDYQHKLDKLTHAEQE 1305 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,683,959 Number of Sequences: 59808 Number of extensions: 270859 Number of successful extensions: 793 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 748 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 792 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1337207630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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