BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0796 (548 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g64170.1 68418.m08057 dentin sialophosphoprotein-related cont... 30 0.89 At5g24740.1 68418.m02920 expressed protein 28 3.6 At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 28 4.7 At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ... 28 4.7 At1g64960.1 68414.m07363 expressed protein 28 4.7 At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 27 6.2 At3g21410.1 68416.m02702 F-box family protein (FBW1) contains si... 27 8.3 >At5g64170.1 68418.m08057 dentin sialophosphoprotein-related contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor [Homo sapiens] Length = 566 Score = 30.3 bits (65), Expect = 0.89 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 43 LVKEVSLEIESIITSRDVITEI-VRDVVEARGELYRNVAEREENEQGRNEPE 195 +V ++SLE S + VI ++ VR + R LYR E+ G N PE Sbjct: 423 VVDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHHGGNRPE 474 >At5g24740.1 68418.m02920 expressed protein Length = 3306 Score = 28.3 bits (60), Expect = 3.6 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -3 Query: 255 IFEMLFLPLLRHGGGVSDAVLGLVPPLFILLSLSNVSVQFSSGF 124 +F + LP+ R+ +SD +L LV L+ +S++ +S GF Sbjct: 950 VFGTIILPVSRYFLNISDDLLDLVASAEDLMLVSSLFTNYSGGF 993 >At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein similar to SP|P31244 DNA repair protein RAD16 {Saccharomyces cerevisiae}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 638 Score = 27.9 bits (59), Expect = 4.7 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = -3 Query: 225 RHGGGVSDAVLGLVPPLFILLSLSNVSVQFSSGFHHVTYDFRDDVTTRDDGLD 67 RH +++ GLV + + L N+ + + H + D + TT D +D Sbjct: 494 RHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAID 546 >At2g18700.1 68415.m02178 glycosyl transferase family 20 protein / trehalose-phosphatase family protein similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase Length = 862 Score = 27.9 bits (59), Expect = 4.7 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +1 Query: 22 DEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEAR 132 D F W KE+ +ES++T+ V+ + + +VE + Sbjct: 708 DHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVK 744 >At1g64960.1 68414.m07363 expressed protein Length = 1168 Score = 27.9 bits (59), Expect = 4.7 Identities = 20/67 (29%), Positives = 30/67 (44%) Frame = -2 Query: 325 NTTYSLKDLISLI*VIICFATSCHLRDALPPPPQTRRRGE*CCPRARSSPVHSPLSQQRF 146 NT SL L+S++ R +P +R+R E C R R+ +P + RF Sbjct: 508 NTVVSLDVLLSVLASDQTHVAKGIARLLIPSYFPSRKRAEEACQRCRTLINRNPKAGARF 567 Query: 145 CTVLLWL 125 C L+ L Sbjct: 568 CEFLVSL 574 >At1g21230.1 68414.m02653 wall-associated kinase, putative similar to wall-associated kinase 1 [Arabidopsis thaliana] GI:3549626; expressed in leaves and stems & induced by salicylic acid or INA (PMID:10380805) Length = 733 Score = 27.5 bits (58), Expect = 6.2 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = -2 Query: 271 FATSCHLRDALPPPPQTRRRGE*CCPRARSSPVHS 167 ++T C PPPP ++ G CC S P+ S Sbjct: 138 YSTGCMSLCDTPPPPNSKCNGVGCCRTEVSIPLDS 172 >At3g21410.1 68416.m02702 F-box family protein (FBW1) contains similarity to F-box domain IPR:001810; Length = 410 Score = 27.1 bits (57), Expect = 8.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +3 Query: 375 KIWLVLLNSMRFIYNHV 425 K WL L N RFIY H+ Sbjct: 63 KRWLALFNDKRFIYKHL 79 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,970,998 Number of Sequences: 28952 Number of extensions: 178097 Number of successful extensions: 597 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 579 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 597 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1033331880 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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