Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0795
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    42   3e-04
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +2

Query: 239 LENSSEEFVDIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYEPNDDECLNPWRDDT 418
           L+N   + + IE+ FY  VH LE ++   +K  +++R  IV G  EP  ++   P  +  
Sbjct: 33  LKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGL 92

Query: 419 XEEELARAVQNA 454
             ++LA   + A
Sbjct: 93  EGDQLAELYKAA 104



 Score = 31.9 bits (69), Expect = 0.36
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 493 YRASN-DPNVKGXPDFWYNIFRDVSMLSEMMQEXD 594
           Y+A+  DP+ KG  DFW    R   +++E ++E D
Sbjct: 101 YKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHD 135


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 304 ECMYFTVKLGLNVDKLL 254
           EC++ + K GLNVDK+L
Sbjct: 188 ECLHISAKSGLNVDKVL 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,269,838
Number of Sequences: 27780
Number of extensions: 230121
Number of successful extensions: 594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)