Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0795
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta...    53   1e-07
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta...    51   5e-07
At5g56950.1 68418.m07109 nucleosome assembly protein (NAP), puta...    48   5e-06
At3g13782.1 68416.m01740 nucleosome assembly protein (NAP) famil...    43   1e-04
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa...    30   1.3  
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa...    30   1.3  
At1g18800.1 68414.m02343 nucleosome assembly protein (NAP) famil...    29   1.8  
At1g74560.1 68414.m08638 nucleosome assembly protein (NAP) famil...    29   2.4  
At5g58950.1 68418.m07384 protein kinase family protein concontai...    27   7.2  

>At4g26110.1 68417.m03759 nucleosome assembly protein (NAP),
           putative similar to nucleosome assembly protein 1
           [Glycine max] GI:1161252; contains Pfam profile PF00956:
           Nucleosome assembly protein (NAP)
          Length = 372

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
 Frame = +2

Query: 209 TPECSSANPRLENSSEEFVDIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYE---- 376
           TP        L +   +  ++EAKF  E   LE KY  LY+PLY KR  IVNGT E    
Sbjct: 48  TPNVRKRVDALRDIQSQHDELEAKFREERAILEAKYQTLYQPLYVKRYEIVNGTTEVELA 107

Query: 377 PNDDECLNPWRDDTXEEE------LARAVQNAAITEGEXKKDDKAIE 499
           P DD  ++   + T EE+      L     N  I+E   ++D+ A++
Sbjct: 108 PEDDTKVDQGEEKTAEEKGVPSFWLTALKNNDVISEEVTERDEGALK 154


>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
           putative similar to nucleosome assembly protein 1
           [Glycine max] GI:1161252; contains Pfam profile PF00956:
           Nucleosome assembly protein (NAP)
          Length = 379

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 26/56 (46%), Positives = 32/56 (57%)
 Frame = +2

Query: 209 TPECSSANPRLENSSEEFVDIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYE 376
           TP        L     ++ ++EAKF+ E  ALE KY KLY+PLY KR  IVNG  E
Sbjct: 48  TPPVRKRVEFLREIQNQYDEMEAKFFEERAALEAKYQKLYQPLYTKRYEIVNGVVE 103


>At5g56950.1 68418.m07109 nucleosome assembly protein (NAP),
           putative similar to nucleosome assembly protein 1
           [Glycine max] GI:1161252; contains Pfam profile PF00956:
           Nucleosome assembly protein (NAP)
          Length = 374

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
 Frame = +2

Query: 266 DIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYEPN---DDECLNPWRDDTXEEE-- 430
           +IE KF  E  ALE KY KLY+PLY KR  IVNG  E     +D  ++   + T EE+  
Sbjct: 67  EIETKFREERAALEAKYQKLYQPLYNKRYEIVNGATEVEGAPEDAKMDQGDEKTAEEKGV 126

Query: 431 ----LARAVQNAAITEGEXKKDDKAI 496
               L     N  I+E   ++D+ A+
Sbjct: 127 PSFWLTALKNNDVISEEITERDEGAL 152


>At3g13782.1 68416.m01740 nucleosome assembly protein (NAP) family
           protein similar to nucleosome assembly protein 1
           [Glycine max] GI:1161252; contains Pfam profile PF00956:
           Nucleosome assembly protein (NAP)
          Length = 329

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +2

Query: 266 DIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYE 376
           ++E KF +E  ALE  Y  LYKPL+ KR  IVNG  E
Sbjct: 84  ELEEKFLAEKSALEATYDNLYKPLFAKRYEIVNGVVE 120


>At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger)
           family protein similar to Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 520

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = +2

Query: 263 VDIEAKFYSEVHALECKYGKLYKPLYEKRAL--IVNGTYEPN---DDECLNPWRDD 415
           +DI+   Y E+ ALE K G +   L E+  L  + +  Y PN   DD CLN  +DD
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLN--KDD 464


>At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger)
           family protein similar to Pfam domain, PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 520

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = +2

Query: 263 VDIEAKFYSEVHALECKYGKLYKPLYEKRAL--IVNGTYEPN---DDECLNPWRDD 415
           +DI+   Y E+ ALE K G +   L E+  L  + +  Y PN   DD CLN  +DD
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLN--KDD 464


>At1g18800.1 68414.m02343 nucleosome assembly protein (NAP) family
           protein similar to SP|Q01105|SET protein (HLA-DR
           associated protein II) (PHAPII) (Phosphatase 2A
           inhibitor I2PP2A) {Homo sapiens}; contains Pfam profile
           PF00956: Nucleosome assembly protein (NAP)
          Length = 256

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 236 RLENSSEEFVDIEAKFYSEVHALECKYGKLYKPLYEKRALIV 361
           +L+   ++   I  K   EV  +E KY  + KP+Y+KR  I+
Sbjct: 29  KLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEII 70


>At1g74560.1 68414.m08638 nucleosome assembly protein (NAP) family
           protein similar to SP|Q01105 SET protein (HLA-DR
           associated protein II) (PHAPII) (Phosphatase 2A
           inhibitor I2PP2A) {Homo sapiens}; contains Pfam profile:
           PF00956 nucleosome assembly protein (NAP)
          Length = 256

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 236 RLENSSEEFVDIEAKFYSEVHALECKYGKLYKPLYEKRALIV 361
           +L+   ++   I  K   EV  +E KY  + KP+Y+KR  ++
Sbjct: 33  KLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEVI 74


>At5g58950.1 68418.m07384 protein kinase family protein concontains
           protein kinase domain, Pfam:PF00069
          Length = 525

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 248 SSEEF-VDIEAKFYSEVHALECKYGKLYKPLYEKRALIVNGTYEPNDDE 391
           +SEEF VD+   F+    A    Y +LY   YE +A+ V     P+DD+
Sbjct: 196 ASEEFRVDMSKLFFGLKFA-HGLYSRLYHGKYEDKAVAVKLITVPDDDD 243


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,545,225
Number of Sequences: 28952
Number of extensions: 213390
Number of successful extensions: 555
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)