BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0790 (518 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 5.2 >01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476, 3085904-3085985,3086085-3086275,3086410-3086616, 3086709-3086871,3087905-3087960,3088035-3088148, 3088599-3089807 Length = 827 Score = 27.9 bits (59), Expect = 5.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 79 LVCPKNTEHRARHAGKCACCP 141 L C K++ R HAGKC CP Sbjct: 313 LQCGKHSCERGCHAGKCGGCP 333 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,784,818 Number of Sequences: 37544 Number of extensions: 234406 Number of successful extensions: 529 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 516 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 529 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1130733700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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