Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0790
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.1  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   8.1  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   8.1  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 85   CPKNTEHRA-RHAGKCACCPACVTLLGEGA 171
            C +  E++  RH G C  CPAC  L+ + A
Sbjct: 1016 CDRCKENKYDRHQG-CLDCPACYNLVQDAA 1044


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 497 RRVTYIVPIS*QGYLYNTYYXISFXFGLLKIH 402
           R +T+I+  +  G + +T+   +  FG+LK+H
Sbjct: 646 RSLTWILENNITGIIDSTFSVENNSFGVLKVH 677


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 118 AGKCACCPACVTLLGEG 168
           AG  +CCPA   L G G
Sbjct: 19  AGTSSCCPAGTGLNGSG 35


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 127 CACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 240
           CAC P  + L   G TCK +  +L    S VC    +C
Sbjct: 24  CAC-PIGIQLKDNGKTCKSWPLQL----SGVCCTVPRC 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,308
Number of Sequences: 2352
Number of extensions: 11669
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)