Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0788
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                31   0.007
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    25   0.36 
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   3.3  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   3.3  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   3.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 0.007
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 201 HFGASSHRQQKQHGQNKTVPPPNHFHFRE 115
           H G+S H Q   H    T+ PP+H H  +
Sbjct: 329 HRGSSPHHQHGNHTMGPTMGPPHHHHHHQ 357


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 172 EATRPEQNSTSTEPFPL*GNYQENINIKHKNPLHFSCYYRNTNFI 38
           E  R ++    +   PL  NY  N N  + N  +++  Y N N+I
Sbjct: 72  ERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 91  NYNYNNNYNNYNKHNYNKLYYNINYI 116


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 82  NPLHFSCYYRNTNFISIFKIFL 17
           NP +   YYR++  +S+F + L
Sbjct: 311 NPPNILLYYRDSLALSVFALIL 332


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 324 NYNYNNNYNNYNKHNYNKLYYNINYI 349


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 115 NYQENINIKHKNPLHFSCYYRNTNFI 38
           NY  N N  + N  +++  Y N N+I
Sbjct: 324 NYNYNNNYNNYNKHNYNKLYYNINYI 349


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 132 HFHFREIIKKISILNTKIHYI 70
           +F FR+    ISIL  K++YI
Sbjct: 169 YFAFRDQGACISILAIKVYYI 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,117
Number of Sequences: 438
Number of extensions: 1739
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)