Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0779
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.7  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 384  SASHHSKSISRTNKKCVSFILLFMTFSDINVSWTRP 491
            S S ++ SIS   KK ++++   M+ +   VS  RP
Sbjct: 1403 STSSNNPSISAFRKKSLAYVQQRMSIAPNRVSQARP 1438


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 384  SASHHSKSISRTNKKCVSFILLFMTFSDINVSWTRP 491
            S S ++ SIS   KK ++++   M+ +   VS  RP
Sbjct: 1403 STSSNNPSISAFRKKSLAYVQQRMSIAPNRVSQARP 1438


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/27 (25%), Positives = 19/27 (70%)
 Frame = -1

Query: 466 SENVINNRINETHFLFVLEIDLLWWLA 386
           +EN I++++ + +  F++ + L+W +A
Sbjct: 427 NENTIHSKLCKLYATFLIALKLVWIVA 453


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 500 IEFWLTTHSTPATV 541
           + FWL  ++TPA V
Sbjct: 87  VSFWLNRNATPARV 100


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 402 KSISRTNKKCVSFILLF 452
           K++ +TNK C +FI+LF
Sbjct: 313 KTVLKTNKYC-NFIILF 328


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 389 CREDEPLLRPVRCPKLG 339
           C++D P++R     KLG
Sbjct: 176 CQDDTPMVRRAAATKLG 192


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 505 LNIVHGLVQDTFISENVINNRINETHFLFVL 413
           L+IVHG+  +      V N+     +FLFVL
Sbjct: 211 LDIVHGVHNELCNLCQVANSIYGFQNFLFVL 241


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 347 WDIGQVLKAARLLCKPPQQVDFEDEQEMRFVYSVIYDVF 463
           W  G ++     LC    +V+ E  Q M  + SV  DV+
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADVY 362


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 347 WDIGQVLKAARLLCKPPQQVDFEDEQEMRFVYSVIYDVF 463
           W  G ++     LC    +V+ E  Q M  + SV  DV+
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVSADVY 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,857
Number of Sequences: 336
Number of extensions: 3363
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)