BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0777 (528 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 36 0.014 Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 29 2.7 Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 29 2.7 AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 29 2.7 Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical pr... 27 8.3 >Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical protein R08D7.4 protein. Length = 371 Score = 36.3 bits (80), Expect = 0.014 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = -3 Query: 367 VKMLDWNEITDLPNKRP-DVILGADIVYDPSILKPLCNV 254 V+ L+W + K P D+I+ AD+VYD ++L LCNV Sbjct: 249 VRSLNWCDFDFSEWKEPTDLIIAADVVYDTALLASLCNV 287 >Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein F18C12.2b protein. Length = 2271 Score = 28.7 bits (61), Expect = 2.7 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -2 Query: 209 ASIIRNELTFESFLQVL--ETYNFHCEKLMQPTNAHIEWDHT 90 A +I NE T E F + ET EK PT I W+HT Sbjct: 778 ADLIWNEKTREEFRHAMDTETRALISEKEQAPTGLPIAWNHT 819 >Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein F18C12.2a protein. Length = 2279 Score = 28.7 bits (61), Expect = 2.7 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -2 Query: 209 ASIIRNELTFESFLQVL--ETYNFHCEKLMQPTNAHIEWDHT 90 A +I NE T E F + ET EK PT I W+HT Sbjct: 778 ADLIWNEKTREEFRHAMDTETRALISEKEQAPTGLPIAWNHT 819 >AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis protein RME-8 protein. Length = 2279 Score = 28.7 bits (61), Expect = 2.7 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -2 Query: 209 ASIIRNELTFESFLQVL--ETYNFHCEKLMQPTNAHIEWDHT 90 A +I NE T E F + ET EK PT I W+HT Sbjct: 778 ADLIWNEKTREEFRHAMDTETRALISEKEQAPTGLPIAWNHT 819 >Z22178-6|CAA80158.2| 265|Caenorhabditis elegans Hypothetical protein F54C8.6 protein. Length = 265 Score = 27.1 bits (57), Expect = 8.3 Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +3 Query: 225 VIFSVTEYFQTLQSGFSIEGS-YTISAPSITSGLLFG 332 + +++E+FQT+ GF++ G+ +T ++ + FG Sbjct: 170 MFITISEFFQTISKGFTVFGTLFTAIWHGLSENVFFG 206 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,455,442 Number of Sequences: 27780 Number of extensions: 237745 Number of successful extensions: 623 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 623 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1038911524 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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