Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0777
         (528 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g27400.1 68418.m03271 expressed protein hypothetical proteins...    38   0.003
At3g50850.1 68416.m05568 expressed protein                             30   1.1  
At3g46290.1 68416.m05010 protein kinase, putative similar to rec...    29   1.9  
At1g63855.3 68414.m07228 expressed protein                             29   1.9  
At1g63855.1 68414.m07229 expressed protein                             29   1.9  
At1g08125.1 68414.m00891 Expressed protein                             29   2.6  
At3g24230.1 68416.m03041 pectate lyase family protein similar to...    28   3.4  
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P...    28   4.5  
At3g24670.1 68416.m03097 pectate lyase family protein similar to...    28   4.5  
At3g48460.1 68416.m05290 GDSL-motif lipase/hydrolase family prot...    27   5.9  
At4g24880.1 68417.m03560 expressed protein                             27   7.8  
At1g27660.1 68414.m03381 ethylene-responsive protein -related co...    27   7.8  

>At5g27400.1 68418.m03271 expressed protein hypothetical proteins -
           different species
          Length = 369

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -3

Query: 340 TDLPNKRPDVILGADIVYDPSILKPLCNV 254
           ++L   RPD++LGAD++YDPS L  L  V
Sbjct: 249 SELSQYRPDIVLGADVIYDPSCLPHLLRV 277


>At3g50850.1 68416.m05568 expressed protein
          Length = 251

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -3

Query: 367 VKMLDWNEITDLPN--KRPDVILGADIVYDPSILKPLCNV*KYSVTE 233
           V  L W EI D+ +  +  D+IL +D+VY   + +PL    ++ + E
Sbjct: 146 VASLRWGEIDDVESLGQNVDLILASDVVYHVHLYEPLLKTLRFLLLE 192


>At3g46290.1 68416.m05010 protein kinase, putative similar to
           receptor-like protein kinase [Catharanthus roseus]
           gi|1644291|emb|CAA97692
          Length = 830

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +3

Query: 225 VIFSVTEYFQTLQSGFSIEGSYTISAPSITSGLLFGRSVIS--FQSNILTSVSESPVKIG 398
           ++ S       +  GF+   +Y I+  S T+G L GR  +S    S +LTS  E    +G
Sbjct: 10  ILISTISILLCICHGFTPVDNYLINCGSPTNGTLMGRIFLSDKLSSKLLTSSKEILASVG 69


>At1g63855.3 68414.m07228 expressed protein
          Length = 196

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -3

Query: 358 LDWNEITDLP--NKRPDVILGADIVYDPS 278
           L W  + D P  + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140


>At1g63855.1 68414.m07229 expressed protein
          Length = 159

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -3

Query: 358 LDWNEITDLP--NKRPDVILGADIVYDPS 278
           L W  + D P  + RP++ILGAD++YD S
Sbjct: 113 LTWG-VWDAPILDLRPNIILGADVLYDSS 140


>At1g08125.1 68414.m00891 Expressed protein
          Length = 315

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -3

Query: 367 VKMLDWNEITDLPNKRP--DVILGADIVYDPSILKPL 263
           V  LDW     +    P  D ++G D+VY   +L+PL
Sbjct: 126 VAELDWGNEDHITAVEPPFDYVIGTDVVYSEQLLEPL 162


>At3g24230.1 68416.m03041 pectate lyase family protein similar to
           pectate lyase GP:14531296 from [Fragaria x ananassa]
          Length = 452

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +2

Query: 113 HLLVALIFHNENYRFPKLVKNFQRLTHF---L*YWRYKCSRHFFCHRIFSDITEWLQY 277
           H  V L+ HN++Y   K+++      HF   L     +C RH + H + +D T W  Y
Sbjct: 296 HDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRC-RHGYFHVVNNDYTHWKMY 352


>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
            profile PF02902: Ulp1 protease family, C-terminal
            catalytic domain; similar to At3g24380, At5g36840,
            At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
            At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
            At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
            At1g25886, At4g03300
          Length = 1314

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 427  VELLISGTAGPILTGLSLTDVKMLDWNEITDL--PNKRPDVILGADIVYDPSILK 269
            +ELL  G     LT +  TD+         D+   +KR D   G DIVY P +LK
Sbjct: 1152 LELLAFGHPFSELTTIRETDMVFYRQKYSVDIYEHSKREDGTRGRDIVYRPDVLK 1206


>At3g24670.1 68416.m03097 pectate lyase family protein similar to
           pectate lyase GP:14531296 from [Fragaria x ananassa]
          Length = 440

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 113 HLLVALIFHNENYRFPKLVKNFQRLTHF---L*YWRYKCSRHFFCHRIFSDITEWLQY 277
           H  V L+ H+++Y   KL++      HF   L     +C RH + H + +D T W+ Y
Sbjct: 284 HNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRC-RHGYFHVVNNDYTHWVMY 340


>At3g48460.1 68416.m05290 GDSL-motif lipase/hydrolase family protein
           similar to lipase [Arabidopsis thaliana] GI:1145627;
           contains InterPro Entry IPR001087 Lipolytic enzyme,
           G-D-S-L family
          Length = 381

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 167 QVLETYNFHCEKLMQPTNAHIEWDHTHINRCLLKIM 60
           QV +T       + +  N +I WD  H+   + K+M
Sbjct: 321 QVFQTCGTDAATVCKDPNQYINWDGVHLTEAMYKVM 356


>At4g24880.1 68417.m03560 expressed protein
          Length = 417

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 231 FSVTEYFQTLQSGFSIEGSYTISAPSITSGLLF 329
           FSV  ++   QSG  +  +YT S P +  GLLF
Sbjct: 230 FSVVPFYNCDQSG--LHSAYTGSLPYVRDGLLF 260


>At1g27660.1 68414.m03381 ethylene-responsive protein -related
           contains similarity to ethylene-inducible ER33 protein
           [Lycopersicon esculentum] gi|5669656|gb|AAD46413
          Length = 453

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 213 INVHVIFSVTEYFQTLQSGFSIEGSYTISAPSITS 317
           IN H  ++     +++ SGF I G Y  S PS +S
Sbjct: 150 INEHKDYTEKLLLKSMSSGFPINGDYGSSLPSSSS 184


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,472,355
Number of Sequences: 28952
Number of extensions: 206615
Number of successful extensions: 496
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)