Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0773
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   3.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   3.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.7  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   8.8  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 2   EMFTNTFFKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
           + +     K F   + E   FK NI+  L   YLD+
Sbjct: 60  QRYNECILKQF-NIVDESGNFKENIVQELTSIYLDE 94


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 2   EMFTNTFFKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
           + +     K F   + E   FK NI+  L   YLD+
Sbjct: 60  QRYNECILKQF-NIVDESGNFKENIVQELTSIYLDE 94


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 348 ELQDRNEKLFFSLL 389
           E+ DRN  LFF LL
Sbjct: 312 EVMDRNGVLFFGLL 325


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 120 IFLLWSKYLGCKPFIILRLNFVLSKINVKND 28
           I L +S       F+IL  ++++  +N++ND
Sbjct: 58  IVLAFSGLFSVFSFLILVSSYIVILVNLRND 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,255
Number of Sequences: 438
Number of extensions: 3548
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)