BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0769 (548 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_35437| Best HMM Match : DUF1212 (HMM E-Value=1.5) 32 0.27 SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 30 1.4 SB_57332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_32737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_25914| Best HMM Match : IL1_propep (HMM E-Value=8.1) 29 2.5 SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12) 29 3.3 SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 29 3.3 SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 4.4 SB_11265| Best HMM Match : LRR_1 (HMM E-Value=0.23) 28 4.4 SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24) 27 7.6 SB_30852| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 SB_26585| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6 SB_49442| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6 SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 SB_30215| Best HMM Match : RVT_1 (HMM E-Value=2.6e-34) 27 7.6 SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 SB_8605| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6 SB_63| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.6 >SB_35437| Best HMM Match : DUF1212 (HMM E-Value=1.5) Length = 184 Score = 32.3 bits (70), Expect = 0.27 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = -2 Query: 340 KDKKPNFLREILQKNTENIYQEVKYKHRKRSFYIIKYRKFNLTSFGIIIITAIGAELQNE 161 +++ L EI + +EN E + R+R I K F +T+FG+ + TAI A + + Sbjct: 62 RERNEERLSEIDELKSENRELENQKPLRERIKAIFKKYGFTVTAFGLAVATAIAAIVTSL 121 Query: 160 GK 155 GK Sbjct: 122 GK 123 >SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) Length = 993 Score = 29.9 bits (64), Expect = 1.4 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKHRKR----SFYIIKYRKF 221 + R++ LFK A+ + +P + ++ K ENI E Y H + S + +RK Sbjct: 867 MARVLPLFKKGAKNIPDNYRPISILPVISKLMENIMFEQLYDHLIKNNILSEHQFGFRKL 926 Query: 220 NLTSFGIIIIT 188 + T++ ++ T Sbjct: 927 HSTTYALLDCT 937 >SB_57332| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 190 Score = 29.1 bits (62), Expect = 2.5 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -2 Query: 397 PKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKHRKR 251 PKLV +++ FHK +KP+F+RE++ T ++ H ++ Sbjct: 79 PKLVKQVL------LTNFHKYQKPDFVREVVPNLTSGLFTSAGSAHARQ 121 >SB_32737| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 359 Score = 29.1 bits (62), Expect = 2.5 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -2 Query: 397 PKLVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKHRKR 251 PKLV +++ FHK +KP+F+RE++ T ++ H ++ Sbjct: 248 PKLVKQVL------LTNFHKYQKPDFVREVVPNLTSGLFTSAGSAHARQ 290 >SB_25914| Best HMM Match : IL1_propep (HMM E-Value=8.1) Length = 131 Score = 29.1 bits (62), Expect = 2.5 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKHRKR----SFYIIKYRKF 221 + R++ +FK A+ + +P + ++ K ENI E Y H + S + +RK Sbjct: 5 MARVLPIFKKGAKNIPDNYRPISILPVISKLMENIMFEQLYDHLIKNNILSEHQFGFRKL 64 Query: 220 NLTSFGIIIIT 188 + T++ ++ T Sbjct: 65 HSTTYALLDCT 75 >SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12) Length = 1286 Score = 28.7 bits (61), Expect = 3.3 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +2 Query: 275 FLIYIFRIFLQNFSQEIRFFILMKCFCSRFEKINY 379 + +Y ++FL F RFFI ++ + ++E I Y Sbjct: 943 YRLYFEKLFLVQFQSFFRFFIALELYTHQYEDIVY 977 >SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1855 Score = 28.7 bits (61), Expect = 3.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK A+ + +P + ++ K ENI E Y H Sbjct: 519 MARVLPLFKKGAKNIPDNYRPISIMPVISKLMENIMFEQLYDH 561 >SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) Length = 991 Score = 28.7 bits (61), Expect = 3.3 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -2 Query: 325 NFLREILQKNTENIYQEVKYKHRKRSFY 242 NF R+I+ +N+EN EV Y R +SF+ Sbjct: 506 NFFRKIVGRNSENSSLEVLYFWRIKSFF 533 >SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) Length = 365 Score = 28.3 bits (60), Expect = 4.4 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Frame = +2 Query: 155 FSLVLQFCPYCGYNDYSERR*IELSVLYYVKTSFSMFIFNFLIYIFR--IFLQNFSQEIR 328 FSLV FC C YN ELS ++ + +S N +Y FR + + FS+ R Sbjct: 273 FSLVSMFCTKCYYNAPE-----ELSTIFLI-LGYSNSAMNPYLYAFRNQKYKETFSKLFR 326 Query: 329 FFILMKCFCSRFEK 370 ++ + S F + Sbjct: 327 KLTIVSRYPSSFRR 340 >SB_11265| Best HMM Match : LRR_1 (HMM E-Value=0.23) Length = 174 Score = 28.3 bits (60), Expect = 4.4 Identities = 12/33 (36%), Positives = 24/33 (72%) Frame = +3 Query: 291 SVFFCKISLRKLGFLSL*NVSAADLKRSTILVT 389 S++ C++ L LG+ ++ NV+AAD+K +L++ Sbjct: 36 SLYLCRLEL-DLGYNAITNVTAADMKGKEMLIS 67 >SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24) Length = 568 Score = 27.5 bits (58), Expect = 7.6 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +2 Query: 77 DNELNFRFNHNTSVFNHFVEKKKQI-IFSLVLQFCPYCGYNDYSER 211 D++ N + ++V NHF+EK + FS+ L+ PY + D S R Sbjct: 99 DSDCNVLCDQYSTVLNHFIEKHAPVRTFSVTLR--PYSPWYDDSLR 142 >SB_30852| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 623 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 179 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 221 >SB_26585| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 317 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 5 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 47 >SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 917 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 423 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 465 >SB_49442| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 914 Score = 27.5 bits (58), Expect = 7.6 Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -2 Query: 391 LVTRIVDLFKSAAETFHKDKKPNFLREILQKNTENI-YQEVKYKHRKRS 248 +V +++ +FK+ K+P+FLR+ +K+ E ++++ + RKR+ Sbjct: 228 VVEKVLRIFKAEVADLCSRKQPSFLRKRTKKDLEEFDFEKLCQEWRKRA 276 >SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 940 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 489 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 531 >SB_30215| Best HMM Match : RVT_1 (HMM E-Value=2.6e-34) Length = 875 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 179 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 221 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 468 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 510 >SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1821 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 1370 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 1412 >SB_8605| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 284 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 5 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 47 >SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1457 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 686 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 728 >SB_63| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 680 Score = 27.5 bits (58), Expect = 7.6 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = -2 Query: 388 VTRIVDLFKSAAETFHKDKKPNFLREILQKNTENIYQEVKYKH 260 + R++ LFK ++T + +P + ++ K E I E Y H Sbjct: 229 MARVLPLFKKGSKTIPDNYRPISILPVISKLMEKIMYEQLYDH 271 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,315,242 Number of Sequences: 59808 Number of extensions: 290500 Number of successful extensions: 864 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 793 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 862 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1264269032 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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