Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0769
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    36   0.019
AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical ...    29   2.2  
AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical...    29   2.2  
Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical ...    28   3.9  
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    28   5.1  

>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
            K10D2.3 protein.
          Length = 1425

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 451  LCIQDPFDHSRNCSVNIYPKLVTRIVDLFKSAAETFHKDKKP 326
            LC++DPFD S N S  +  K+   I+ +F ++   F  +K P
Sbjct: 1286 LCVEDPFDLSHNLSSGVNKKMFVFIMKVFINSRAVFMSEKPP 1327


>AC006769-1|AAF60590.2|  287|Caenorhabditis elegans Hypothetical
           protein Y45G12C.8 protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 255 FLCLYLTS*YIFSVFFCK 308
           FL LYL S  +FS+F+CK
Sbjct: 17  FLALYLNSFILFSIFYCK 34


>AC006722-17|ABP57812.1|  141|Caenorhabditis elegans Hypothetical
           protein Y19D10A.17 protein.
          Length = 141

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 255 FLCLYLTS*YIFSVFFCK 308
           FL LYL S  +FS+F+CK
Sbjct: 17  FLALYLNSFILFSIFYCK 34


>Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.3 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 304 QKNTENIYQEVK-YKHRKRSFYIIKYRKFNLTSFGIIII 191
           +KN  N+++ V  Y   K  FY+I  +KF L S GI I+
Sbjct: 165 KKNFINLFECVPPYVELKNVFYLILVKKFFLISCGIFIM 203


>Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 343 HKDKKPNFLREILQKNTENIYQEVKY----KHRKRSFYIIKYRKFNLTSFGIIIITAI 182
           H +K  + ++  + KN E    E  Y    + +KR+   + Y KFNLTS G ++ T +
Sbjct: 97  HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154


>Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical
           protein C17D12.3 protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 343 HKDKKPNFLREILQKNTENIYQEVKY----KHRKRSFYIIKYRKFNLTSFGIIIITAI 182
           H +K  + ++  + KN E    E  Y    + +KR+   + Y KFNLTS G ++ T +
Sbjct: 97  HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154


>AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 343 HKDKKPNFLREILQKNTENIYQEVKY----KHRKRSFYIIKYRKFNLTSFGIIIITAI 182
           H +K  + ++  + KN E    E  Y    + +KR+   + Y KFNLTS G ++ T +
Sbjct: 97  HTNKDGSAVKPFIVKNVERHSDEEPYDVYLQKKKRNEEGMIYWKFNLTSTGKVLETLV 154


>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
            C04A11.3 protein.
          Length = 1228

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -2

Query: 364  KSAAETFHKDKKPNFLREILQKNTENIYQEVKYKHRKRSFYIIK 233
            K   E  H+ K+ +FL + LQ+N E + Q +  KH++R   I K
Sbjct: 954  KEQIEIEHQLKEKDFLMQ-LQQNAEAMLQRMAEKHKERMASIEK 996


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +3

Query: 282 YIFSVFFCKISLRKLGFLSL*NVSAADLKRSTILVTNLGYILTEQFLE*SNGSCIHKEVS 461
           ++ S +FC +SL  +GF  L  V   +    +I+   +G ILT   ++ S    I K  S
Sbjct: 320 FLDSFYFCLVSLLTVGFGDLHPVGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGIAKMHS 379

Query: 462 SRNG 473
              G
Sbjct: 380 IGRG 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,138,241
Number of Sequences: 27780
Number of extensions: 254297
Number of successful extensions: 812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)