Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0763
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 246  VVICN*CSGIVLKLNLQFNDRAALA-SLEADLCE 148
            V +C+ C   + + NLQ N+   L   ++A  C+
Sbjct: 1373 VAVCDACYSTIEEKNLQVNESGKLIHKIDAQDCD 1406


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 215 TIPEHQLHMTTGTQNAL 265
           +I    LH T GT+NAL
Sbjct: 350 SIETDDLHATCGTKNAL 366


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 31  IFNTSIIKLCDC 66
           +FN ++I +CDC
Sbjct: 248 LFNCTLIIMCDC 259


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 541 AAASAPTTAPEGGPAS 494
           AAA  P T   G PAS
Sbjct: 31  AAAPPPATTSSGSPAS 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,758
Number of Sequences: 336
Number of extensions: 1960
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)