Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0756
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light ch... 104 7e-23
Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical... 41 0.001
Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 36 0.037
AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical ... 32 0.34
AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical ... 32 0.34
AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 28 5.6
>U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light chain
protein 1 protein.
Length = 89
Score = 104 bits (249), Expect = 7e-23
Identities = 59/94 (62%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKKYNPTGIASWVV 275
M DRKAVIKNADMS++MQQDA+DCATQALEK+NIEK IAA+IKKEFDKKYNPT W
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----DRWAILLFKSG 362
I+ R T T + + AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical
protein M18.2 protein.
Length = 90
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKKYNPTGIASWVV 275
M + K +K DM + + + +A +NI+K +AAF+K+E DKK+ A+W V
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFG----ATWHV 56
Query: 276 ILARM*HTRLA 308
I + +R++
Sbjct: 57 ICGKCFGSRVS 67
>AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical
protein Y73B6BL.43 protein.
Length = 186
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQVGY 343
HCI G++FGS+VT E FIYF +G + +
Sbjct: 107 HCICGKHFGSFVTFEPDSFIYFRIGTIAF 135
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 111 AVIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKKYNP 251
A ++++ M M+Q+A A +++ +++E IA +K FD++Y P
Sbjct: 58 ADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGP 104
>Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical
protein C47A10.6 protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.037
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Frame = -1
Query: 263 CNAGRIVFLVKFFLDECSYXL--FNVKFLERLSCTVNSILLH----LFAHVSILY----- 117
C+A + +L+ +L C Y L FN+KFL ++ C ++L+H F H+ LY
Sbjct: 34 CSAVAVFYLIHTWLSICRYKLMHFNLKFLMKIHCA--ALLIHCVPRFFLHLFDLYYYFFG 91
Query: 116 -DCFAITHLVLGLFLLR 69
DC+ + L F+LR
Sbjct: 92 VDCYDMQPSSLRCFILR 108
>AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical
protein Y10G11A.2b protein.
Length = 129
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKKY 245
+I++ ++ E +++ AL+ IE IA+F+K++FD KY
Sbjct: 51 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 94
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQV 337
C+VGRNFGS++ + FI+F + ++
Sbjct: 100 CVVGRNFGSHL--DPIQFIHFTVSKI 123
>AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical
protein Y10G11A.2a protein.
Length = 111
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKKY 245
+I++ ++ E +++ AL+ IE IA+F+K++FD KY
Sbjct: 33 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 76
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQV 337
C+VGRNFGS++ + FI+F + ++
Sbjct: 82 CVVGRNFGSHL--DPIQFIHFTVSKI 105
>AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical
protein Y10G11A.3 protein.
Length = 134
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKXIAAFIKKEFDKK 242
+I+ ++ E +++ AL+ IE IA+F+K++FD K
Sbjct: 50 IIQETNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAK 92
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 227 FLDECSYXLFNVKFLERLSCTVNSILLHLFAH--VSILYDCFAITHLVLGLFLLR 69
++D C+ LFN+ +R++ + + +F H V ++Y ++ + ++L +LR
Sbjct: 520 WMDVCTLPLFNITLSQRIATFATAPFMSIFLHWMVGMVYVFYSASFVILLREILR 574
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,927,287
Number of Sequences: 27780
Number of extensions: 292981
Number of successful extensions: 676
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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