Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0754
         (389 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R894 Cluster: Putative uncharacterized protein PY0732...    36   0.28 
UniRef50_Q9U0H4 Cluster: RNA helicase, putative; n=2; Plasmodium...    36   0.37 
UniRef50_UPI00004997CC Cluster: conserved hypothetical protein; ...    33   1.5  
UniRef50_Q895B3 Cluster: Conserved protein; n=5; Clostridium|Rep...    32   3.4  
UniRef50_Q7RDC4 Cluster: Putative uncharacterized protein PY0549...    32   3.4  
UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:...    32   4.5  

>UniRef50_Q7R894 Cluster: Putative uncharacterized protein PY07329;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY07329 - Plasmodium yoelii yoelii
          Length = 834

 Score = 35.9 bits (79), Expect = 0.28
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = -1

Query: 380 YNTFIFLXXTNNLMVKLIYKPYSKHLYSILR*KSTMEYQIEIYVKILLTHRIQNTEDING 201
           ++ F  L  TN  ++   +K Y +HL++I    S +++    +VKI+      N E+++ 
Sbjct: 683 FDCFSNLTQTNKNLLHF-FKIYKRHLFNICNGYSKLKFYSNSFVKIVNYFVENNLENMDT 741

Query: 200 *KVNS*FAVKHKNEYKYK-IDTFLSIHTNYNYIPYYI 93
             + +     HK  YK K I   L++H  +NY+  YI
Sbjct: 742 KDITALVYYYHKINYKKKDILKNLAVHI-FNYLFIYI 777


>UniRef50_Q9U0H4 Cluster: RNA helicase, putative; n=2;
           Plasmodium|Rep: RNA helicase, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 1304

 Score = 35.5 bits (78), Expect = 0.37
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -1

Query: 155 KYKIDTFLSIHTNYNYIPYYIFD 87
           KYK D ++S  +N  Y+PYYI+D
Sbjct: 102 KYKCDVYISTSSNREYVPYYIYD 124


>UniRef50_UPI00004997CC Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 260

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 155 KYKIDTFLSIHTNYNYIPYYI----FDSNQFVYFQH 60
           KY I+ F   H N  ++PYYI    F SN ++ F H
Sbjct: 17  KYSINAFEICHINNRHVPYYIINSEFPSNGYIIFSH 52


>UniRef50_Q895B3 Cluster: Conserved protein; n=5; Clostridium|Rep:
           Conserved protein - Clostridium tetani
          Length = 845

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 182 FAVKHKNEYKYKI-DTFLSIHTNYNYIPYYIFDSNQFVYFQHY 57
           + +KH  +Y Y   D F  I  N    P+YI +S  ++YF+ Y
Sbjct: 772 YQIKHDEQYSYVFPDAFKGIKENQ---PFYIGESELYIYFEPY 811


>UniRef50_Q7RDC4 Cluster: Putative uncharacterized protein PY05498;
            n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY05498 - Plasmodium yoelii yoelii
          Length = 1595

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -1

Query: 389  LTIYNTFIFLXXTNNLMVKLIYKPYSKHLYSILR*KSTMEYQIEIYVKILLTHRIQNTED 210
            +++YN        NN +++++YK ++K++      K+        YVK+L T    N ++
Sbjct: 1311 ISLYNLKNNNKINNNHLIRVLYKLFNKNI------KNDSNSNFNYYVKLLFTENFNNIDE 1364

Query: 209  ING*KVNS*FAVKHK-NEYKYKIDTF 135
            I G   N  F   H  N + Y I+ F
Sbjct: 1365 IIGIFKNLHFFNDHYINLFFYIIECF 1390


>UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:
           Haem lyase - Naegleria gruberi
          Length = 474

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -1

Query: 386 TIYNTFIFLXXTNNLMVKLIYKPYSKHLYSILR*KSTMEYQIEIYVKILLTHRIQNTEDI 207
           +IY   IF    NN+ +  I      + Y+I++  +     I   + I + + I N  +I
Sbjct: 321 SIYLICIFFYI-NNIYIYTILYTIIIYTYTIVKKINMYNNHITYIIIIYILYSITN--EI 377

Query: 206 NG*KVNS*FAVKHKNEYKYKIDTFLSIHTNYNYIPYYIFDSNQFV--YFQHY 57
           N  ++    A  ++NE+ Y  +  + I  N NYI Y   + N+F+  Y+  Y
Sbjct: 378 N--EITIQIANTYENEFSY--NKIIEIDININYIEYINKNKNKFISNYYNIY 425


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,129,409
Number of Sequences: 1657284
Number of extensions: 4629576
Number of successful extensions: 9838
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9830
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)