BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0754
(389 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox transcrip... 22 6.9
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 22 9.1
>AF230521-1|AAF36974.2| 185|Anopheles gambiae homeobox
transcription factor protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 104 PYYIFDSNQFVYFQHY*DVNFTNAQT 27
P+ + NQ+ Y Q+Y + + N QT
Sbjct: 132 PHSHYSHNQYYYMQNYSNYSQHNFQT 157
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 21.8 bits (44), Expect = 9.1
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 143 DTFLSIHTNYNYIPYYI-FDSNQFVYFQHY*DV-NFTNAQ 30
D F ++TN+++ P YI D ++ F ++ F N Q
Sbjct: 334 DGFQQVYTNFSFGPRYIKIDPDRLEVFSTVKEITGFINIQ 373
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,767
Number of Sequences: 2352
Number of extensions: 5288
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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