Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0747
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    32   0.38 
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF125964-6|AAD14755.2|  589|Caenorhabditis elegans Acid sphingom...    29   2.6  
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    29   3.5  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     29   3.5  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     29   3.5  

>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 86  CPKNTEHRARHAGKCACCPACVTLLGEGATC-KIYSKELGETPSAVCK-EPLKC 241
           CP + +   +H+G+CA   AC+     G  C K++S ++  T    CK +P+ C
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQM--TKKFCCKSDPIDC 111


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
 Frame = +2

Query: 38  GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCA-CCPACVTLLGEGATCKIYSKELGETPS 214
           G D C    C   P  CP N     R +G C  CCP   T +  G  C + S   G    
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCM-NGGCCDLPSCPSGGFAI 586

Query: 215 AVC 223
           ++C
Sbjct: 587 SMC 589


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 92  KNTEHRARHAGKCACCPACVTLLGEGA 172
           K T HR +H    ACCP C  ++   A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 146 CVTLLGEGATCKIYSKELGETPSAVCKEPLKCIKRVSL 259
           CV   G+G+T  ++S  +G+  SA+C E    + R++L
Sbjct: 137 CVWGQGDGSTMPVFSTSVGKIGSAICWENYMPLYRMTL 174


>AF125964-6|AAD14755.2|  589|Caenorhabditis elegans Acid
           sphingomyelinase protein 3 protein.
          Length = 589

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +2

Query: 224 KEPLKCIKRVSLSLCSRFH*QENISLQYFYHDLFEI*FVYGIKLIII 364
           K+  +C+  +++ +C  FH ++N    +   D F   F+Y IK I++
Sbjct: 38  KKTEECVMEIAVFICETFHIEDNDVCNFIISD-FSDEFMYVIKQILV 83


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +2

Query: 38  GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 302 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 360

Query: 215 AVC 223
            +C
Sbjct: 361 GIC 363


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +2

Query: 38  GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 244 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 302

Query: 215 AVC 223
            +C
Sbjct: 303 GIC 305


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +2

Query: 38  GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
           GT   +++P +   LVC  N   R     GKC C P       + A C +     G    
Sbjct: 426 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 484

Query: 215 AVC 223
            +C
Sbjct: 485 GIC 487


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,066,509
Number of Sequences: 27780
Number of extensions: 365923
Number of successful extensions: 866
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)