Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0747
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g78860.1 68414.m09192 curculin-like (mannose-binding) lectin ...    29   3.3  
At1g13870.1 68414.m01628 expressed protein similar to KTI12 prot...    29   3.3  
At5g03760.1 68418.m00339 glycosyl transferase family 2 protein s...    29   4.3  
At5g11620.1 68418.m01359 SWIM zinc finger family protein / mitog...    28   5.7  
At4g04570.1 68417.m00670 protein kinase family protein contains ...    28   5.7  
At2g31440.1 68415.m03841 expressed protein identical to cDNA end...    28   7.6  
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains...    28   7.6  
At5g56090.1 68418.m06998 cytochrome oxidase assembly family prot...    27   10.0 

>At1g78860.1 68414.m09192 curculin-like (mannose-binding) lectin
           family protein low similarity to Ser/Thr protein kinase
           [Zea mays] GI:2598067; contains Pfam profile PF01453:
           Lectin (probable mannose binding)
          Length = 443

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 122 GKCACCPACVTLLGEGATCKIYS 190
           G+C  CP+ + LLG   TCKI S
Sbjct: 330 GQCNACPSDIGLLGWDETCKIPS 352


>At1g13870.1 68414.m01628 expressed protein similar to KTI12 protein
           (SP:P34253) {Saccharomyces cerevisiae}; contains Prosite
           PS00070: Aldehyde dehydrogenases cysteine active site
          Length = 302

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 509 IIILDELHTLSRYPDRVTCIIHTISFRFCSVY 414
           I+I+D L+++  Y   + CI      R+C VY
Sbjct: 76  IVIVDSLNSIKGYRYELWCIARAAGIRYCVVY 107


>At5g03760.1 68418.m00339 glycosyl transferase family 2 protein
           similar to beta-(1-3)-glucosyl transferase GB:AAC62210
           GI:3687658 from [Bradyrhizobium japonicum], cellulose
           synthase from Agrobacterium tumeficiens [gi:710492] and
           Agrobacterium radiobacter [gi:710493]; contains Pfam
           glycosyl transferase, group 2 family protein domain
           PF00535
          Length = 533

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 448 IIQVTLSGYRDNVCNSSSIIIYSHKSLIIVPIWRLGL 558
           +I  +  GYRD++    S+++   ++ +IVP  RLG+
Sbjct: 9   VIPDSFMGYRDDITMQMSMVLDQIRAPLIVPALRLGV 45


>At5g11620.1 68418.m01359 SWIM zinc finger family protein /
           mitogen-activated protein kinase kinase kinase
           (MAPKKK)-related contains weak similarity to
           Swiss-Prot:P53349 mitogen-activated protein kinase
           kinase kinase 1 (MAPK/ERK kinase kinase 1, MEK kinase 1,
           MEKK 1) [Mus musculus]; contains Pfam profile PF04434:
           SWIM zinc finger
          Length = 273

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 167 GATCKIYSKELGETPSAVCKEPLKCIKRV 253
           GATC +Y+  L  TP+  C +  K  K +
Sbjct: 53  GATCNVYTVTLMATPTCTCPDRKKPCKHI 81


>At4g04570.1 68417.m00670 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 654

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 421 EQKRNEIVCIIQVTLSGYRDNVC---NSSSIIIYSHKSLIIVPI 543
           E  RNEI+ +IQ+ L   ++N       SS+II+     II+P+
Sbjct: 580 ENPRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGSETIIIPL 623


>At2g31440.1 68415.m03841 expressed protein identical to cDNA
           endonuclease III homologue (nth1 gene) GI:11181951
          Length = 250

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 94  LRANKWWLYAWIFFTVVC 41
           L+AN WW YA +  T VC
Sbjct: 59  LKANVWWPYALLVITSVC 76


>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 475

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 2   CVASXSYGALVCGTDYCEKNPCIQPPLVCPKNTE 103
           C+A  S G L+ G+    KNP  +P L  P NT+
Sbjct: 86  CLAGLSTGKLLVGSSNL-KNPAAEPKLGIPVNTK 118


>At5g56090.1 68418.m06998 cytochrome oxidase assembly family protein
           contains PF02628: Cytochrome oxidase assembly protein
          Length = 457

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 628 YQIWGM*LGIFFLLPISHF 572
           +++WG  LGI F LP S+F
Sbjct: 181 HRMWGRGLGIMFALPFSYF 199


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,592,319
Number of Sequences: 28952
Number of extensions: 316804
Number of successful extensions: 683
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)