Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0744
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 479 ILIVVQNPVENLKFTKYYHLFWLKG 553
           ++I V+N +E  + T ++H  W +G
Sbjct: 184 VVIDVENHIEGNEVTLHWHGVWQRG 208


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 479 ILIVVQNPVENLKFTKYYHLFWLKG 553
           ++I V+N +E  + T ++H  W +G
Sbjct: 184 VVIDVENHIEGNEVTLHWHGVWQRG 208


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 96  VFE*IIIFLRILSYKILY 149
           +F  II F R LSYK++Y
Sbjct: 6   LFMIIICFERNLSYKVMY 23


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 476 FILIVVQNPVENLKFTKYYH 535
           F+L++V N V  +   KY H
Sbjct: 161 FVLLIVSNVVLKILVEKYRH 180


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 110 NLFKYSCKTC 81
           N+++YSC+ C
Sbjct: 283 NVYRYSCRDC 292


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 110 NLFKYSCKTC 81
           N+++YSC+ C
Sbjct: 41  NVYRYSCRDC 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,524
Number of Sequences: 336
Number of extensions: 2732
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)