Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0744
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0670 - 23336385-23336504,23336769-23337092,23338315-233383...    29   3.7  
10_08_0895 + 21390780-21390853,21391945-21392043,21392400-213925...    28   6.5  

>06_03_0670 -
           23336385-23336504,23336769-23337092,23338315-23338387,
           23338715-23338761,23338955-23339104,23339409-23339474,
           23339940-23340013,23340740-23341520,23341730-23342146,
           23344001-23344003
          Length = 684

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 435 LILKNVKSLDGSRSRTTVFALSTNAVNRPAYCTEM 331
           L+LKN K+L+G +SR       ++A+  P  C+E+
Sbjct: 177 LLLKNQKALEGDKSRG--MKRKSSAITHPTQCSEV 209


>10_08_0895 +
           21390780-21390853,21391945-21392043,21392400-21392553,
           21393759-21393798,21395094-21395138,21395727-21395833
          Length = 172

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 135 YKILYYVYQNRYN*AR*FTRRIFLESIKMANEAEDTIRKLRRTKAWLAXSL 287
           Y   + +  +R+   + F +   L+S+ M     D +RK R +KAWL  S+
Sbjct: 90  YSTKHRISIDRFLQLKIFVKIAILDSVNMGG-GRDILRKERSSKAWLKNSI 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,016,730
Number of Sequences: 37544
Number of extensions: 226331
Number of successful extensions: 470
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)