Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0744
         (598 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25)              71   9e-13
SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)              71   9e-13
SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)              71   9e-13
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)              66   2e-11
SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17)              56   2e-08
SB_47827| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   7e-08
SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   1e-05
SB_55295| Best HMM Match : Chordopox_E11 (HMM E-Value=1.4)             28   6.6  
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  

>SB_53948| Best HMM Match : Robl_LC7 (HMM E-Value=9.3e-25)
          Length = 101

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 30/66 (45%), Positives = 48/66 (72%)
 Frame = +2

Query: 302 IPIKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDKEFI 481
           + I++T+DN  +  Y   + ++   A++ VRDLDP NDL FLRIRS+K E++VAP+ ++ 
Sbjct: 31  VAIRSTMDNSTTQIYLSNIQSMTQMARSAVRDLDPLNDLKFLRIRSRKYEILVAPENDYT 90

Query: 482 LIVVQN 499
           LIV+Q+
Sbjct: 91  LIVIQS 96


>SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
          Length = 160

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 31/68 (45%), Positives = 50/68 (73%)
 Frame = +2

Query: 305 PIKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDKEFIL 484
           PI++ LDN  ++ YA     L   A++ VRD+DP NDL+ LR++S+K E+++AP +E++L
Sbjct: 93  PIRSDLDNSTTLLYASNCHHLAKLARSTVRDIDPQNDLSILRVKSRKYEIIIAPYEEYML 152

Query: 485 IVVQNPVE 508
           IVVQ+ +E
Sbjct: 153 IVVQSDLE 160


>SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
          Length = 101

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 31/68 (45%), Positives = 50/68 (73%)
 Frame = +2

Query: 305 PIKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDKEFIL 484
           PI++ LDN  ++ YA     L   A++ VRD+DP NDL+ LR++S+K E+++AP +E++L
Sbjct: 34  PIRSDLDNSTTLLYASNCHHLAKLARSTVRDIDPQNDLSILRVKSRKYEIIIAPYEEYML 93

Query: 485 IVVQNPVE 508
           IVVQ+ +E
Sbjct: 94  IVVQSDLE 101


>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 794

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = +2

Query: 305 PIKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDKEFIL 484
           PIK+++D   +  YA     L   A + VRD+DP N+L F+R+R+ K E MVAPD E++L
Sbjct: 137 PIKSSMDIPTTQLYASEFAPLAHFAHSAVRDMDPQNELRFIRVRTNKMEFMVAPDNEYLL 196

Query: 485 IVVQ 496
           IV+Q
Sbjct: 197 IVIQ 200


>SB_13938| Best HMM Match : Robl_LC7 (HMM E-Value=2.5e-17)
          Length = 111

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/63 (38%), Positives = 40/63 (63%)
 Frame = +2

Query: 308 IKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDKEFILI 487
           + T+LD   +  Y      LV+ A+  +RD DP +DL F R+R+ K E+++AP+ ++ LI
Sbjct: 38  LHTSLDTTQTTAYTQQCVPLVELARATIRDTDPEDDLRFFRVRTLKHELIIAPEDKYTLI 97

Query: 488 VVQ 496
           V+Q
Sbjct: 98  VIQ 100


>SB_47827| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 22/55 (40%), Positives = 39/55 (70%)
 Frame = +2

Query: 308 IKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLRIRSKKSEVMVAPDK 472
           ++T++D   + QYA +   L   A+  VRD+DP++DL  LR+R+K+ EV++AP++
Sbjct: 31  LRTSMDTTTTNQYANMCKNLASMARGTVRDVDPADDLLILRVRTKEHEVIIAPER 85


>SB_22482| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 371

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +2

Query: 302 IPIKTTLDNHISVQYAGLLTALVDKAKTVVRDLDPSNDLTFLR 430
           +PI++TLDN  ++QY  +   +   A++VVRD DP+NDL  LR
Sbjct: 289 MPIRSTLDNSSTLQYVNMCKTMCGIARSVVRDTDPTNDLKILR 331


>SB_55295| Best HMM Match : Chordopox_E11 (HMM E-Value=1.4)
          Length = 504

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 76  IQHVLHEYLNKL*YFYEYYHIKSYITFIKTDIIEHVNLRGEYF 204
           I+ +L +YL       +  H+K  I     DI  HV L+G Y+
Sbjct: 134 IKSLLTDYLEAQRASIKELHVKKMICTPNADIAYHVELKGPYY 176


>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1356

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 352 PIDRVGGQSENCRARPGSV 408
           P  R GG+SE CRA P +V
Sbjct: 232 PCSRTGGRSEACRATPTAV 250


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,930
Number of Sequences: 59808
Number of extensions: 279974
Number of successful extensions: 582
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)