Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0740
         (250 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062632-1|AAH62632.1|  102|Homo sapiens LOC400590 protein protein.    36   0.018
BC119665-1|AAI19666.1|  137|Homo sapiens LOC339290 protein protein.    33   0.22 
S70612-1|AAB30785.1|  638|Homo sapiens glycine transporter type ...    28   6.3  
S70609-1|AAB30784.1|  692|Homo sapiens glycine transporter type ...    28   6.3  

>BC062632-1|AAH62632.1|  102|Homo sapiens LOC400590 protein protein.
          Length = 102

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = -2

Query: 177 LFGPRTHLPPFTL*PAHTLLSPLSSH 100
           L GP  HL  F L PAH+LL PL SH
Sbjct: 64  LLGPLPHLSSFALQPAHSLLPPLGSH 89


>BC119665-1|AAI19666.1|  137|Homo sapiens LOC339290 protein protein.
          Length = 137

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = -2

Query: 177 LFGPRTHLPPFTL*PAHTLLSPLSSH 100
           L GP  HL  F   PAH+LLS L SH
Sbjct: 75  LLGPLPHLSSFAFQPAHSLLSLLGSH 100


>S70612-1|AAB30785.1|  638|Homo sapiens glycine transporter type 1c
           protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 175 IWTSHASSSFYALACAYASFAT*LSF 98
           +W   AS  FY+LACA+    T  S+
Sbjct: 292 VWGDAASQIFYSLACAWGGLITMASY 317


>S70609-1|AAB30784.1|  692|Homo sapiens glycine transporter type 1b
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 175 IWTSHASSSFYALACAYASFAT*LSF 98
           +W   AS  FY+LACA+    T  S+
Sbjct: 346 VWGDAASQIFYSLACAWGGLITMASY 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,865,358
Number of Sequences: 237096
Number of extensions: 380206
Number of successful extensions: 4084
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4084
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)