Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0739
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 101 6e-22
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 51 8e-07
SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_45731| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.3
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_51591| Best HMM Match : HECT (HMM E-Value=0) 28 8.4
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 101 bits (242), Expect = 6e-22
Identities = 55/128 (42%), Positives = 73/128 (57%)
Frame = +3
Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
N H + +LE G V S+VTQNVD LH KAGS+ VIELHG S+ V CL C R L
Sbjct: 232 NEAHYALAKLETLGSVHSLVTQNVDALHTKAGSKNVIELHGCSHRVICLGCNQITARTAL 291
Query: 435 QEILTENNPDMESSFSMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGDNVPQY 614
Q+ + E NPD + PDGD K+ ++ ++ G LKP++VFFGD+VP+
Sbjct: 292 QKRMIEFNPDWHAVGQGQAPDGDTFLTSEAVKDFKVPPCKACGGILKPEVVFFGDSVPKQ 351
Query: 615 RVGTSQKR 638
V + R
Sbjct: 352 IVNIAYDR 359
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GI DYRSE GLYA +N +P++YQ F+K +RQRYWARNY+GWP F QP
Sbjct: 180 GIRDYRSEGKGLYAITNDRPMEYQVFLKSAVMRQRYWARNYVGWPEFGSRQP 231
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 249 ATNVTHLCIRELEKKGKVTSIVTQNVDXLHHKAG--SEKVIELHGTSYLVQCLKCPYEID 422
A +TH+ I +L+++G V +++QNVD LH K+G K+ ELHG ++ +C KC E
Sbjct: 230 APTLTHMAIVKLQEEGLVHYVISQNVDGLHLKSGYPRSKLSELHGNMFVEKCDKCNKEYV 289
Query: 423 R 425
R
Sbjct: 290 R 290
>SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 32.3 bits (70), Expect = 0.39
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +3
Query: 543 HSAQSVKGPLKPDIVFFGDNVPQ 611
+ + ++G +KPD+VFFG+++P+
Sbjct: 236 YDGEQIRGVIKPDVVFFGEDLPK 258
>SB_45731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 339 HKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENNPD---MESSFSMIRPDGDVD 509
H GS +IE++G CL P H+ +++ D ++SS M+ P D D
Sbjct: 193 HMRGSNNIIEINGLGRPGDCLPVPTNTINHDSDYEDDDDDDDDLSVQSSSDMLPPHLDAD 252
Query: 510 CR 515
R
Sbjct: 253 FR 254
>SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 279 ELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENN 458
+LEK G + + V N+ K ELH + + Q L+CP ++ + + I +N
Sbjct: 6 QLEKSGLLITDVVTNITTTT-LIPDRKGWELHRLTAITQLLRCPIKLAKIDKPPIQRQNT 64
Query: 459 PDMESSFSMIR 491
SF + R
Sbjct: 65 LKKYLSFQLNR 75
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 512 SREQVEKFRAPLCPKCEGAFETRYSVFW*QCTPISRGNKSEKK 640
+R+Q EK + CP C+ AF Y++ QC + N E K
Sbjct: 281 ARQQNEKLKKFKCPTCDKAFIRNYTL---QCHMLIHKNVKEHK 320
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -1
Query: 647 LVTSFLTCSHAILGYIVTKKHYIWFQRPLHTLGRVELGIFLLVPSTINIAIR 492
+++ F S A IVTKK + GR+E+G+F+++ + +A R
Sbjct: 9 VISLFFLASSAAKDPIVTKKVFFDITIGGEKAGRIEIGLFVIIKTYYLLATR 60
>SB_51591| Best HMM Match : HECT (HMM E-Value=0)
Length = 694
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +3
Query: 300 VTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHELQEILTENNPDMESSF 479
VTS+V L ++ E V E S L+ + E+D+ EL LT N D E+
Sbjct: 232 VTSLVVAGTSSLGNRQAVEHVTENCSDSELMAAVMMEQEVDQ-ELVSDLTPANRDNETID 290
Query: 480 SMIRPDGD 503
S DGD
Sbjct: 291 SQ-ENDGD 297
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 650 LLVTSFLTCSHAILGYIVTKKHYIWFQRPLHTLGRVELGIFLLVPSTINIAIRSYHGETT 471
L V S +TC I+GY + + W +H + ++ F P I I + SY G +
Sbjct: 303 LAVLSLITCLFIIIGYSLQE----WQSWKIHNIPDFDINNF---PVAIGIIVFSYCGHSV 355
Query: 470 F 468
F
Sbjct: 356 F 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,771,140
Number of Sequences: 59808
Number of extensions: 519857
Number of successful extensions: 1193
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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