Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0739
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical pr...    81   6e-16
Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical pr...    81   6e-16
Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical pr...    77   2e-14
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    56   1e-09
U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir relat...    51   9e-07
AY669392-1|AAU05397.1|  158|Caenorhabditis elegans truncated aro...    29   3.2  
AY669391-1|AAU05396.1|  158|Caenorhabditis elegans truncated aro...    29   3.2  
Z81496-6|CAB04070.2|  313|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U40933-9|ABD63229.1|  867|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z50177-5|CAE46663.1|  289|Caenorhabditis elegans Hypothetical
           protein F46G10.7b protein.
          Length = 289

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = +3

Query: 249 ATNVTHLCIRELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRH 428
           A N+ H  + + E   +   ++TQNVD LH KAGS+ V ELHG++  V+C  C Y   R 
Sbjct: 95  APNINHYALSKWEASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQ 154

Query: 429 ELQEILTENNPDMESSF---SMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGD 599
             Q+ L   NP  +        + PDGD+       K  ++    S  G +K D+ FFG+
Sbjct: 155 TYQDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPSCGGLMKTDVTFFGE 214

Query: 600 NVPQYRV 620
           NV   +V
Sbjct: 215 NVNMDKV 221



 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS+DVGLYAR  HKPI +Q++++  + RQRYW+RN++ WPRF    P
Sbjct: 45  GIPDYRSKDVGLYARIAHKPIYFQDYMRSNRCRQRYWSRNFLAWPRFGQAAP 96


>Z50177-4|CAA90546.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.7a protein.
          Length = 287

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
 Frame = +3

Query: 249 ATNVTHLCIRELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRH 428
           A N+ H  + + E   +   ++TQNVD LH KAGS+ V ELHG++  V+C  C Y   R 
Sbjct: 93  APNINHYALSKWEASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQ 152

Query: 429 ELQEILTENNPDMESSF---SMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGD 599
             Q+ L   NP  +        + PDGD+       K  ++    S  G +K D+ FFG+
Sbjct: 153 TYQDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPSCGGLMKTDVTFFGE 212

Query: 600 NVPQYRV 620
           NV   +V
Sbjct: 213 NVNMDKV 219



 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS+DVGLYAR  HKPI +Q++++  + RQRYW+RN++ WPRF    P
Sbjct: 43  GIPDYRSKDVGLYARIAHKPIYFQDYMRSNRCRQRYWSRNFLAWPRFGQAAP 94


>Z50177-6|CAA90547.1|  287|Caenorhabditis elegans Hypothetical
           protein F46G10.3 protein.
          Length = 287

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +1

Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
           GIPDYRS+DVGLY ++  +PI +Q+F+K  K RQRYW+R+Y+ WPRF+   P
Sbjct: 43  GIPDYRSKDVGLYTKTALEPIYFQDFMKSKKCRQRYWSRSYLNWPRFAQALP 94



 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
 Frame = +3

Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
           N  H  + + E   K   ++TQNVD LH KAGS+ + ELHG +  V+C  C Y   R   
Sbjct: 95  NFNHYALSKWEAANKFHWLITQNVDGLHLKAGSKMITELHGNALQVKCTSCEYIETRQTY 154

Query: 435 QEILTENNPDMESSF---SMIRPDGDVDCRGNK*KNSELHSAQSVKGPLKPDIVFFGDNV 605
           Q+ L   NP  +  F        D D        +  ++    +  G +K D+  FG+N+
Sbjct: 155 QDRLNYANPGFKEQFVSPGQQELDADTALPLGSEQGFKIPECLNCGGLMKTDVTLFGENL 214

Query: 606 PQYRVGTSQKRSD*Q*CCICNGI 674
              ++    K+ +      CNG+
Sbjct: 215 NTDKIKVCGKKVN-----ECNGV 232


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 55.6 bits (128), Expect(2) = 1e-09
 Identities = 23/62 (37%), Positives = 39/62 (62%)
 Frame = +3

Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDXLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
           +V+H  I+ELE  G++    TQN+D L H+ G ++V+E HG+     C +C  + D +E+
Sbjct: 216 SVSHRFIKELETSGRLLRNYTQNIDTLEHQTGIKRVVECHGSFSKCTCTRCGQKYDGNEI 275

Query: 435 QE 440
           +E
Sbjct: 276 RE 277



 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 94  SLGIPDYRSEDVGLYAR 144
           S GIPD+RS+D G+YAR
Sbjct: 159 SCGIPDFRSKD-GIYAR 174



 Score = 24.2 bits (50), Expect(2) = 1e-09
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +3

Query: 561 KGPLKPDIVFFGDNV 605
           +G +KP+IVFFG+++
Sbjct: 291 EGVIKPNIVFFGEDL 305


>U97193-7|AAK68163.1|  299|Caenorhabditis elegans Yeast sir related
           protein 2.4 protein.
          Length = 299

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +3

Query: 234 EIQLCATNVTHLCIRELEKKGKVTSIVTQNVDXLHHKAG--SEKVIELHGTSYLVQCLKC 407
           + Q+    V+H  I  L K G + +I+TQNVD L  K G   E +IE+HG  +L  C  C
Sbjct: 95  DFQVARPGVSHKSILALHKAGYIKTIITQNVDGLDRKVGIPVEDLIEVHGNLFLEVCQSC 154

Query: 408 PYEIDRHEL 434
             E  R E+
Sbjct: 155 FSEYVREEI 163


>AY669392-1|AAU05397.1|  158|Caenorhabditis elegans truncated
           aromatic L-amino aciddecarboxylase protein.
          Length = 158

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/51 (43%), Positives = 25/51 (49%)
 Frame = -2

Query: 565 PFTLWAEWSSEFFYLFPRQSTSPSGLIMEKLLSISGLFSVNISWSSCLSIS 413
           P T W      FF  FP      S  IM  +LS SGL SV  SW +C SI+
Sbjct: 67  PATHWNH--PHFFAYFPAGLAYHS--IMADILS-SGLSSVGFSWMACPSIT 112


>AY669391-1|AAU05396.1|  158|Caenorhabditis elegans truncated
           aromatic L-amino aciddecarboxylase protein.
          Length = 158

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/51 (43%), Positives = 25/51 (49%)
 Frame = -2

Query: 565 PFTLWAEWSSEFFYLFPRQSTSPSGLIMEKLLSISGLFSVNISWSSCLSIS 413
           P T W      FF  FP      S  IM  +LS SGL SV  SW +C SI+
Sbjct: 67  PATHWNH--PHFFAYFPAGLAYHS--IMADILS-SGLSSVGFSWMACPSIT 112


>Z81496-6|CAB04070.2|  313|Caenorhabditis elegans Hypothetical
           protein F09C6.2 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 690 INCEAGSHYKYSITASHFFSDLFP 619
           I CE G  Y+++ + +  FSD FP
Sbjct: 288 IKCEYGWQYEFTFSVTRLFSDQFP 311


>Z69635-6|CAA93461.1|  695|Caenorhabditis elegans Hypothetical
           protein F19B6.4 protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 604 TLSPKNTISGFKGPFTLWAEWSSEFFYLFPRQS 506
           TLS          PFT    W+++FF++F R S
Sbjct: 390 TLSSSRREHPETAPFTFPRTWTAQFFFIFQRSS 422


>U40933-9|ABD63229.1|  867|Caenorhabditis elegans Hypothetical
           protein F20D12.1b protein.
          Length = 867

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 600 CHQKTLYLVSKA-PSHFGQSGARNFSTCSLDNQHRHPVLSWRNYFPYLDYSLLIFLGVHV 424
           C  K +++ S +   H G+ G+ NF T    N   HP     ++ P++ +       +H 
Sbjct: 466 CKDKGMHIGSYSMDQHNGERGSENFLTSVFKNLVTHPNYRDSSFTPFVLFISDDVPNIHE 525

Query: 423 CL 418
           CL
Sbjct: 526 CL 527


>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
           protein F20D12.1a protein.
          Length = 1030

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 600 CHQKTLYLVSKA-PSHFGQSGARNFSTCSLDNQHRHPVLSWRNYFPYLDYSLLIFLGVHV 424
           C  K +++ S +   H G+ G+ NF T    N   HP     ++ P++ +       +H 
Sbjct: 629 CKDKGMHIGSYSMDQHNGERGSENFLTSVFKNLVTHPNYRDSSFTPFVLFISDDVPNIHE 688

Query: 423 CL 418
           CL
Sbjct: 689 CL 690


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,940,711
Number of Sequences: 27780
Number of extensions: 382680
Number of successful extensions: 954
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)