Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0739
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    25   0.69 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.5  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 585 LYLVSKAPSHFGQSGARNFSTCSLDNQHRHPVLSWRNYFPYLDYSLLIFLGVH 427
           +Y++          G RNFSTCS      HP  +      ++ Y  L F+ VH
Sbjct: 99  IYILMAILRMSADGGCRNFSTCS-----SHPTAA------FISYGTLFFIYVH 140


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQY 168
           W+  IP+   +DV +Y R N + + Y
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEESMNY 686


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 91  WSLGIPDYRSEDVGLYARSNHKPIQY 168
           W+  IP+   +DV +Y R N + + Y
Sbjct: 661 WNFTIPNMYFKDVFIYNRPNEESMNY 686


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 148  YYGHTDQHPPICSQEYLTTTNFISVLLH 65
            +Y  T Q PP     Y+T++   S+LLH
Sbjct: 1396 HYTLTVQVPPSAPVLYVTSSTSSSILLH 1423


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 148  YYGHTDQHPPICSQEYLTTTNFISVLLH 65
            +Y  T Q PP     Y+T++   S+LLH
Sbjct: 1392 HYTLTVQVPPSAPVLYVTSSTSSSILLH 1419


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 585 LYLVSKAPSHFGQSGARNFSTCSLDNQHRHPVLSWRNY 472
           +Y++          G RNFSTCS      HP  ++ +Y
Sbjct: 98  IYILMAILRMSADGGCRNFSTCS-----SHPTAAFISY 130


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 581 IWFQRPLHTLGRVELGIFLLV 519
           +W +R L +L    LG+FLL+
Sbjct: 589 MWLRRALASLMVFSLGLFLLL 609


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 109 DYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRY 207
           DY    + L   + H P+ YQ + K   + Q+Y
Sbjct: 416 DYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQY 448


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 613 IAWEQVRKEVT 645
           I WE V+KEVT
Sbjct: 90  IRWESVQKEVT 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,000
Number of Sequences: 438
Number of extensions: 4930
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)