Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0736
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   116   5e-28
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.3  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  116 bits (280), Expect = 5e-28
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +3

Query: 255 SSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALP 434
           S++   KDKFQ+NLDVQ F+PEEISVK  D  ++VEGKHEEK+D HGY+SR F RRY LP
Sbjct: 6   SAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLP 65

Query: 435 EGCXAESVESRLSSDGVLSVIAPRK 509
           +G     + S LSSDG+L++  PRK
Sbjct: 66  KGHNEADIVSSLSSDGILTITCPRK 90


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
 Frame = +3

Query: 300 VQHFAPEEISVKTADGYIVVEGKH---------EEKKDQHGYISRQFTRRYALPEGCXAE 452
           ++ + PEE +V  ++ + +V+G+          E + ++  Y S    +  +      + 
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSF 127

Query: 453 SVESRLSSDGVLSV--IAPRKCRQQWRVNARFR 545
              S  S  G  S+  I+P++   + R+N  FR
Sbjct: 128 QQSSYESESGAGSIVQISPQRVSLKLRLNEAFR 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,055
Number of Sequences: 2352
Number of extensions: 15144
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)