Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0735
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3 pr...    31   5.8  
AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine recepto...    31   5.8  

>AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3
            protein.
          Length = 4870

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = -1

Query: 232  EAPYTQRRGFRLVPSNKSCKLHLHQVKLHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFF 53
            E P+   +    V    +   HL QV+   R  K     VW        K+ V  C  F 
Sbjct: 3439 EEPFNPEKTVERVQRISAAVFHLEQVEQPLRSKK----AVWHKLLSKQRKRAVVAC--FR 3492

Query: 52   HSSLYHIPKHRTL 14
             + LY++P+HR++
Sbjct: 3493 MAPLYNLPRHRSI 3505


>AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine receptor
            protein.
          Length = 4866

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = -1

Query: 232  EAPYTQRRGFRLVPSNKSCKLHLHQVKLHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFF 53
            E P+   +    V    +   HL QV+   R  K     VW        K+ V  C  F 
Sbjct: 3435 EEPFNPEKTVERVQRISAAVFHLEQVEQPLRSKK----AVWHKLLSKQRKRAVVAC--FR 3488

Query: 52   HSSLYHIPKHRTL 14
             + LY++P+HR++
Sbjct: 3489 MAPLYNLPRHRSI 3501


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,525,132
Number of Sequences: 237096
Number of extensions: 2068398
Number of successful extensions: 3869
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3866
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)