BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0728 (628 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0451 - 3404749-3405171,3405444-3405599,3405711-3406583,340... 31 0.75 07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 30 1.7 02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 28 7.0 >07_01_0451 - 3404749-3405171,3405444-3405599,3405711-3406583, 3406847-3406942 Length = 515 Score = 31.1 bits (67), Expect = 0.75 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = -2 Query: 183 RQQKQHGQNKTVPPPNHFHFREI 115 R +K HG+ +T+PP H+H +E+ Sbjct: 385 RYRKAHGKLRTLPPCPHYHLKEV 407 >07_03_1003 + 23239829-23240121,23240257-23240349,23240785-23240993, 23241585-23241729,23241809-23241881,23242165-23242311, 23242411-23242536,23242653-23242712 Length = 381 Score = 29.9 bits (64), Expect = 1.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 68 EKCNGIFVFNIDIFLIISLKWKWFG 142 +KC GIF+ NI + ++ K WFG Sbjct: 211 QKCKGIFLLNISLRMLHISKQPWFG 235 >02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425, 2657523-2657649,2657731-2657812,2658172-2658196 Length = 2621 Score = 27.9 bits (59), Expect = 7.0 Identities = 9/17 (52%), Positives = 15/17 (88%) Frame = -2 Query: 141 PNHFHFREIIKKISILN 91 P +FHFR+I++KI +L+ Sbjct: 1380 PENFHFRDIVEKIELLS 1396 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,280,769 Number of Sequences: 37544 Number of extensions: 202018 Number of successful extensions: 568 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 567 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1525730988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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