Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0728
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA...    31   1.3  
AE014297-154|AAF52091.1|  934|Drosophila melanogaster CG14656-PA...    29   3.9  
AY051452-1|AAK92876.1|  426|Drosophila melanogaster GH11964p pro...    29   5.1  
AE014134-1445|AAS64659.1|  534|Drosophila melanogaster CG8086-PC...    29   5.1  
AE014298-140|AAN09035.1|  237|Drosophila melanogaster CG32814-PA...    29   6.8  
Z98269-5|CAB10973.1| 1741|Drosophila melanogaster EG:87B1.2,FBgn...    28   9.0  
U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel siste...    28   9.0  
AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p pro...    28   9.0  
AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,...    28   9.0  
AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,...    28   9.0  

>AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA
           protein.
          Length = 858

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 198 GASSHRQQKQHGQNKTVPPPNH 133
           G S H+QQ+QH QN   PP +H
Sbjct: 54  GVSLHQQQQQHHQNHQQPPHSH 75


>AE014297-154|AAF52091.1|  934|Drosophila melanogaster CG14656-PA
           protein.
          Length = 934

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 186 HRQQKQHGQNKTVPPPNHFHFREIIKKISILNTKMPLHFS 67
           H+ Q+QH Q    P P+++H       +++L+   P HF+
Sbjct: 673 HQHQQQHVQQAQAPQPHYYH-----SSVAVLHQPPPHHFT 707


>AY051452-1|AAK92876.1|  426|Drosophila melanogaster GH11964p
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 408 TDTPIRSCLDPAKHRVHVITCHSTXAKCFTSVTSEA 515
           +DTP  S  +P KH +H    +S   K    VT++A
Sbjct: 176 SDTPAPSAYEPEKHSLHSTPAYSFGTKSDIRVTTDA 211


>AE014134-1445|AAS64659.1|  534|Drosophila melanogaster CG8086-PC,
           isoform C protein.
          Length = 534

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 408 TDTPIRSCLDPAKHRVHVITCHSTXAKCFTSVTSEA 515
           +DTP  S  +P KH +H    +S   K    VT++A
Sbjct: 176 SDTPAPSAYEPEKHSLHSTPAYSFGTKSDIRVTTDA 211


>AE014298-140|AAN09035.1|  237|Drosophila melanogaster CG32814-PA
           protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 408 TDTPIRSCLDPAKHRVHVITCHSTXAKCFTSVTSEAATITTKP 536
           T T   +      H     T H+T     T+ T+  A ITTKP
Sbjct: 135 TTTTTHNTTTTTTHNTTTTTTHNTTTHTTTTTTTTTAEITTKP 177


>Z98269-5|CAB10973.1| 1741|Drosophila melanogaster
            EG:87B1.2,FBgn0004655;wapl protein.
          Length = 1741

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 192  SSHRQQKQHGQNKTVPPPNHFHFREIIKKISILNTK 85
            +S+    QH  + + PPP  F F++  K+   L+T+
Sbjct: 903  NSNNSSLQHDGSSSSPPPRDFKFKDKFKRTLTLDTQ 938


>U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel sister
            chromatids protein protein.
          Length = 1768

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 192  SSHRQQKQHGQNKTVPPPNHFHFREIIKKISILNTK 85
            +S+    QH  + + PPP  F F++  K+   L+T+
Sbjct: 903  NSNNSSLQHDGSSSSPPPRDFKFKDKFKRTLTLDTQ 938


>AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 192  SSHRQQKQHGQNKTVPPPNHFHFREIIKKISILNTK 85
            +S+    QH  + + PPP  F F++  K+   L+T+
Sbjct: 903  NSNNSSLQHDGSSSSPPPRDFKFKDKFKRTLTLDTQ 938


>AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,
           isoform B protein.
          Length = 1092

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 192 SSHRQQKQHGQNKTVPPPNHFHFREIIKKISILNTK 85
           +S+    QH  + + PPP  F F++  K+   L+T+
Sbjct: 254 NSNNSSLQHDGSSSSPPPRDFKFKDKFKRTLTLDTQ 289


>AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,
            isoform A protein.
          Length = 1741

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 192  SSHRQQKQHGQNKTVPPPNHFHFREIIKKISILNTK 85
            +S+    QH  + + PPP  F F++  K+   L+T+
Sbjct: 903  NSNNSSLQHDGSSSSPPPRDFKFKDKFKRTLTLDTQ 938


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,137,203
Number of Sequences: 53049
Number of extensions: 357720
Number of successful extensions: 1156
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)