Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0727
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 38 0.007
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.15
SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 33 0.20
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13) 31 0.47
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 31 0.47
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_15403| Best HMM Match : CH (HMM E-Value=0) 30 1.4
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 29 1.9
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 29 2.5
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 29 2.5
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.3
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_36204| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 5.8
SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_29012| Best HMM Match : Avirulence (HMM E-Value=1.1) 27 7.6
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Frame = +2
Query: 32 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC---------PACVTLLGEGATCK 181
VCG+D +N C L CPKN +H G CA C CVT L + A C
Sbjct: 1157 VCGSDKVSYRNKCYMIALNCPKNKYVYVKHEGYCAPCRLAECHKVYAKCVTTLYQTARCV 1216
Query: 182 IYS-KELGETPSAVCKXPLK 238
+ +E AVC +K
Sbjct: 1217 CPTLQECAARKGAVCASDMK 1236
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 17 PY-GALVCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYS 190
PY A VCGTD + CI C R +HAG+C C V G C +
Sbjct: 368 PYVNAPVCGTDDRTYPSECIMKTSACADKKAVRVKHAGECGPCGTLVCT--NGKNC--VT 423
Query: 191 KELGETPSAVCKXP 232
G T AVC P
Sbjct: 424 SHQGLTRQAVCACP 437
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +2
Query: 32 VCGTDYCEK-NPCIQPPLVCPKNTEHRARHAGKCACC 139
VCGTD N C+ C K H G C C
Sbjct: 229 VCGTDKSSYLNECVMKARACRKEKSVTVAHRGFCGAC 265
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = +2
Query: 32 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCA-----CCPAC 148
VCG+D NPC+ VC N + R +H G C C P C
Sbjct: 129 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 173
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKI 184
VCG+D NPC+ C N +H GKC +C +G CK+
Sbjct: 180 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM 232
>SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 9 RXSRTVLWYVVQTTVKKIHAYSHHLFALRTLSIAPD 116
R R VLW V + ++ + A+S+ LF+L + + PD
Sbjct: 171 RSERRVLWDVASSKIRAVTAFSNSLFSLNSNAFCPD 206
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 32 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCKI 184
VCG+D NPC+ C N +H GKC +C +G CK+
Sbjct: 37 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM 89
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 83 VCPKNTEHRARHAGKCACCPACVTLLG-EGATCKIYSKE 196
+CP NT KC CPA ++ G +GAT K +E
Sbjct: 2764 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRE 2802
>SB_13882| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.2e-13)
Length = 340
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 83 VCPKNTEHRARHAGKCACCPACVTLLG-EGATCKIYSKE 196
+CP NT KC CPA ++ G +GAT K +E
Sbjct: 65 LCPPNTYQDQEQQSKCHMCPAGLSTFGLQGATSKDQCRE 103
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 68 IQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAVCKXPLKC 241
++P L CPK T A C+ CP + G GA ++ S+ C+ +C
Sbjct: 390 VEPCLPCPKGTYQTAIGQMSCSECPGTKSTHGPGADSHDMCLDIDNCASSPCQNGGRC 447
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/66 (30%), Positives = 25/66 (37%)
Frame = +2
Query: 35 CGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPS 214
C + C KN PP+VCPK+ E CC C SK + + P
Sbjct: 1785 CPSTCCIKN---SPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICA--SKCISKCPE 1839
Query: 215 AVCKXP 232
CK P
Sbjct: 1840 KCCKQP 1845
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 32 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGET 208
+CGTD N C + T H G C P+C L CK YS +
Sbjct: 1246 ICGTDGKTYNNDKDLESAACAQQTSIVRWHKGPCTVEPSCANL-----QCKYYSYCIVRD 1300
Query: 209 PSAVCKXP 232
AVC P
Sbjct: 1301 GGAVCTCP 1308
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +2
Query: 32 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGET 208
VCG+D N C+ C NT R G C C +TCK +
Sbjct: 1217 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCDPCSNVTCDSPPYSTCKAQD----DQ 1272
Query: 209 PSAVCKXP 232
P+ VC P
Sbjct: 1273 PTCVCVEP 1280
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 29 LVCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACC 139
LVCGTD N C+ C N+ + + G C C
Sbjct: 1519 LVCGTDNITYSNECLMKYQACRTNSALKVKRKGDCDVC 1556
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 32 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKC 130
VCG+D NPC+ C N +H GKC
Sbjct: 51 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKC 84
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 32 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 142
VCG+D N C+ C NT R G C CP
Sbjct: 10 VCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCEPCP 47
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/76 (31%), Positives = 29/76 (38%)
Frame = +2
Query: 44 DYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAVC 223
D+C PC + C KN E RH C C P EG C S+ + S C
Sbjct: 359 DHCFSKPC-KNGATC-KNKEGDPRHFYTCTCAPGY-----EGRDC---SRVIDMCVSNPC 408
Query: 224 KXPLKCIXRVSLSXCS 271
K C V+ CS
Sbjct: 409 KLNAACTPLVNDFHCS 424
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 32 VCGTDY-CEKNPCIQPPLVCPKNTEHRARHAGKCACCP 142
VCGTD N C+ C N R G C CP
Sbjct: 172 VCGTDNNTYDNECLMRQQACVANATVAVRRKGHCEPCP 209
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 5 VASXP-YGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAG 124
V S P YG Y EK+P + PP V PK+ AR G
Sbjct: 878 VLSPPVYGKTFRLNGYNEKSPKVSPPPVKPKSYSPEARWCG 918
>SB_36204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 17 PYGALVCGTDYCEKNPCIQPPLVCPK 94
P AL+ GT+ K C PPLVCPK
Sbjct: 67 PLSALISGTE-TNKQRC--PPLVCPK 89
>SB_58026| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 850
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 38 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATC 178
GT E C L CP+ T R A C+ CP E +C
Sbjct: 506 GTMQSESVACCWECLQCPEGTVTSIRGATNCSTCPVTQKSNRERTSC 552
>SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 185 KSCKLHLHQVKLH-KRDNKHTFQRVWRDAQCS 93
K+ K H+ VK H KR N TF ++ QC+
Sbjct: 27 KTVKFHVFSVKFHEKRSNSTTFGQIPPSRQCT 58
>SB_48390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 59 NPCIQPPLVCPKNTEHRARHAGKCACCPACV 151
N C+ P L C N E+R R K CC + +
Sbjct: 162 NSCLNPFLYCLTNKEYR-REFTKLLCCKSAI 191
>SB_29012| Best HMM Match : Avirulence (HMM E-Value=1.1)
Length = 444
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 509 KLYXTXXIHCPDXPDXVTCIIHTXSXRFCAVY 414
+L+ T HC D I+ T R CA+Y
Sbjct: 323 RLHQTDCAHCTDFTRQTVRIVQTPPDRLCALY 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,573,175
Number of Sequences: 59808
Number of extensions: 288993
Number of successful extensions: 712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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